Lidstrom:Sorvall Centrifuge: Difference between revisions

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== Manuals ==
 
* [http://www.geminibv.nl/labware/sorvall-gsa-rotor/sorvall-rotor-gsa-gs3-sa600-se12-sm24-ss34-manual.pdf Sorvall rotors]
== Background ==
** Rotors we have:
*** SS-34.  Holds 8*50 mL, spins at ___ RPM/____ RCF
*** GS-3.
*** ____.  Holds eppendorf (1.5mL) tubes
[[image:Lidstrom_Sorvoll.png|thumb|upright=1.0|center|Lidstrom Sorvoll centrifuge]]
[[image:Lidstrom_Sorvoll.png|thumb|upright=1.0|center|Lidstrom Sorvoll centrifuge]]


[[image:Lidstrom_sorvoll_speed_instructions.png|thumb|upright=2.0|center|Lidstrom sorvoll speed instructions]]
We have a Sorvoll RC-5B centrifuge that is useful for spinning large volumes in 0.5L bottles or medium-sized (a few mL) volumes very quickly
 
== Rotors ==
[http://www.geminibv.nl/labware/sorvall-gsa-rotor/sorvall-rotor-gsa-gs3-sa600-se12-sm24-ss34-manual.pdf Sorvall rotors]
 
 
=== SS-34 ===
* Holds 8*50 mL, spins at '''[http://www.geminibv.nl/labware/sorvall-gsa-rotor/sorvall-rotor-gsa-gs3-sa600-se12-sm24-ss34-manual.pdf 20,000 RPM/36,900 RCF]'''
** BUT Katya (circa 2010) recommends using it at <= 18,000 RPM
**Tubes: [[image:Lidstrom_SS-34 tubes.png|thumb|upright=0.3|center|SS-34 tubes]]  
***Can't be autoclaved. 
**** Actually, Amanda might have autoclaved them before. 
***Can't write on body; can only write on cap.  Sandy says stickers don't stick.


[[image:SS-34 rotor speeds and k factors.png|thumb|upright=2.0|center|SS-34 rotor speeds and k factors]]
[[image:SS-34 rotor speeds and k factors.png|thumb|upright=2.0|center|SS-34 rotor speeds and k factors]]
=== GS-3 ===
* [http://www.thermoscientific.fr/eThermo/CMA/PDFs/Various/File_582.pdf GS-3].
** BUT Katya (circa 2010) recommends using it at <= 7,500
** For bigger bottles.  (0.5L)
** Holds eppendorf (1.5mL) tubes
* Spins at '''[http://www.geminibv.nl/labware/sorvall-gsa-rotor/sorvall-rotor-gsa-gs3-sa600-se12-sm24-ss34-manual.pdf 9,000 RPM/13,700 RCF]'''


[[image:GS-3 rotor speeds and k factors.png|thumb|upright=2.0|center|GS-34 rotor speeds and k factors]]
[[image:GS-3 rotor speeds and k factors.png|thumb|upright=2.0|center|GS-34 rotor speeds and k factors]]
== Explanation of RCF ==
[[image:RCF_explanation.png|thumb|upright=2.0|center|RCF explanation]]
* For reference, the benchtop 50mL centrifuges (e.g. [https://static.thermoscientific.com/images/D21714~.pdf ST-15R] with a [https://extranet.fisher.co.uk/webfiles/fr/Pjointes/Documentation/SOR007_EN%20SORVALL%20ST16&ST40%20CENTRIFUGE.pdf TX-400] swinging bucket rotor) we have spin at 4696 RCF.
*There are stickers with maximum speeds.  These were set by Katya, a Lidstrom Lab manager, circa 2011.  It is unknown what the motivation was for keeping the rotors below maximum speed.
[[image:Lidstrom_sorvoll_speed_instructions.png|thumb|upright=2.0|center|Lidstrom sorvoll speed instructions]]
== Instructions ==
Example protocol for AM1:
*
Janet's SIP3-4 centrifugation:
* Chill to 4<sup>o</sup>C with SS-34 rotor inside
* Fill correct tubes
* Spin for ___ min at ___ RCF at ___<sup>o</sup>C
== Centrifugation Math & Basics ==
* [http://www.sigmaaldrich.com/technical-documents/articles/biofiles/centrifugation-basics.html Sigma summary]:
** sedimentation rate is proportional to RFC, and proportional to the square of the particle diameter (cell diameter).
** [[image:Lidstrom_Stokes_equation.png|thumb|upright=2.0|center|Stoke's equation]]
** [[image:Lidstrom centrifugation speeds for applications.png|thumb|upright=2.0|center|centrifugation speeds for applications]]

Revision as of 17:57, 21 January 2015

Back to Protocols


Background

Lidstrom Sorvoll centrifuge

We have a Sorvoll RC-5B centrifuge that is useful for spinning large volumes in 0.5L bottles or medium-sized (a few mL) volumes very quickly

Rotors

Sorvall rotors


SS-34

  • Holds 8*50 mL, spins at 20,000 RPM/36,900 RCF
    • BUT Katya (circa 2010) recommends using it at <= 18,000 RPM
    • Tubes:
      SS-34 tubes
      • Can't be autoclaved.
        • Actually, Amanda might have autoclaved them before.
      • Can't write on body; can only write on cap. Sandy says stickers don't stick.
SS-34 rotor speeds and k factors

GS-3

  • GS-3.
    • BUT Katya (circa 2010) recommends using it at <= 7,500
    • For bigger bottles. (0.5L)
    • Holds eppendorf (1.5mL) tubes
  • Spins at 9,000 RPM/13,700 RCF
GS-34 rotor speeds and k factors

Explanation of RCF

RCF explanation
  • For reference, the benchtop 50mL centrifuges (e.g. ST-15R with a TX-400 swinging bucket rotor) we have spin at 4696 RCF.
  • There are stickers with maximum speeds. These were set by Katya, a Lidstrom Lab manager, circa 2011. It is unknown what the motivation was for keeping the rotors below maximum speed.
Lidstrom sorvoll speed instructions

Instructions

Example protocol for AM1:

Janet's SIP3-4 centrifugation:

  • Chill to 4oC with SS-34 rotor inside
  • Fill correct tubes
  • Spin for ___ min at ___ RCF at ___oC

Centrifugation Math & Basics

  • Sigma summary:
    • sedimentation rate is proportional to RFC, and proportional to the square of the particle diameter (cell diameter).
    • Stoke's equation
    • centrifugation speeds for applications