Lidstrom:MM1/MM2/MM3/HY

From OpenWetWare

Revision as of 18:29, 2 May 2013 by Janet B. Matsen (Talk | contribs)
(diff) ←Older revision | Current revision (diff) | Newer revision→ (diff)
Jump to: navigation, search

Back to Lidstrom:Protocols

What is the difference between MM1/MM2/MM3/HY?=

  • They all have the same trace elements solution. The primary difference is the nitrogen source:
    • MM1/HY uses nitrate
    • MM2 uses ammonium
    • MM3 has no added nitrogen
      • MM3 is used when growing on methylamine, which releases N as it is metabolized

If all organisms assimilate N into biomass as NH4+ why do we give them MM3?

  • This is an interesting question, as the organisms must convert nitrate (NO3-) into ammonium to assimilate it. Two likely factors:
    • Ammonium is too toxic
      • In methanotrophs, it interferes with pMMO (methane assimilation enzyme). We don't have a tested hypothesis for why ammonium would be toxic to methylotroph.
    • They prefer to convert nitrate to ammonium (using NADH) to release energy, as they have an excess of NADH due to their metabolic strategy.

Why don't we have a media with nitrite?

  • It is toxic.
Personal tools