LEMB

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Laboratory of Molecular Evolution & Bioinformatics - LEMB

Our Laboratory is interested in Molecular Evolution and reconstructing the evolutionary past of.

Lab Members

Paolo Zanotto - PI

Daniel Ferreira - Postdoc

Caio Freire - Postdoc

Atila Iamarino - Science Communicator

Research

Project description

We have

Contact

Department of Microbiology

Biomedical Sciences Institute - ICB II
University of Sao Paulo - USP
Av. Prof. Lineu Prestes, 1374
Sao Paulo - SP - Brazil - 05508-000

Publications

1. Freire CC, Iamarino A, Soumaré PO, Faye O, Sall AA, and Zanotto PM. Reassortment and distinct evolutionary dynamics of Rift Valley Fever virus genomic segments. Sci Rep. 2015 Jun 23;5:11353. DOI:10.1038/srep11353 |
2. Faye O, Freire CC, Iamarino A, Faye O, de Oliveira JV, Diallo M, Zanotto PM, and Sall AA. Molecular evolution of Zika virus during its emergence in the 20(th) century. PLoS Negl Trop Dis. 2014;8(1):e2636. DOI:10.1371/journal.pntd.0002636 |
3. Oliveira JV, de Brito AF, Braconi CT, de Melo Freire CC, Iamarino A, and de Andrade Zanotto PM. Modularity and evolutionary constraints in a baculovirus gene regulatory network. BMC Syst Biol. 2013 Sep 4;7:87. DOI:10.1186/1752-0509-7-87 |
4. Delatorre E, Couto-Fernandez JC, Guimarães ML, Vaz Cardoso LP, de Alcantara KC, Stefani MM, Romero H, Freire CC, Iamarino A, de A Zanotto PM, Morgado MG, and Bello G. Tracing the origin and northward dissemination dynamics of HIV-1 subtype C in Brazil. PLoS One. 2013;8(9):e74072. DOI:10.1371/journal.pone.0074072 |
5. Bello G, Zanotto PM, Iamarino A, Gräf T, Pinto AR, Couto-Fernandez JC, and Morgado MG. Phylogeographic analysis of HIV-1 subtype C dissemination in Southern Brazil. PLoS One. 2012;7(4):e35649. DOI:10.1371/journal.pone.0035649 |
6. Iamarino A, de Melo FL, Braconi CT, and Zanotto PM. BF integrase genes of HIV-1 circulating in São Paulo, Brazil, with a recurrent recombination region. PLoS One. 2012;7(4):e34324. DOI:10.1371/journal.pone.0034324 |
7. Fausto S, Machado FA, Bento LF, Iamarino A, Nahas TR, and Munger DS. Research blogging: indexing and registering the change in science 2.0. PLoS One. 2012;7(12):e50109. DOI:10.1371/journal.pone.0050109 |
8. Romano CM, de Carvalho-Mello IM, Jamal LF, de Melo FL, Iamarino A, Motoki M, Pinho JR, Holmes EC, de Andrade Zanotto PM, and VGDN Consortium. Social networks shape the transmission dynamics of hepatitis C virus. PLoS One. 2010 Jun 23;5(6):e11170. DOI:10.1371/journal.pone.0011170 |
9. de Castro Oliveira JV, de Melo FL, Romano CM, Iamarino A, Rizzi TS, Yeda FP, Hársi CM, Wolff JL, and de Andrade Zanotto PM. Structural and phylogenetic relationship of ORF 31 from the Anticarsia gemmatalis MNPV to poly (ADP-ribose) polymerases (PARP). Virus Genes. 2008 Oct;37(2):177-84. DOI:10.1007/s11262-008-0253-x |