Jin:Publications: Difference between revisions
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===2014=== | ===2014=== | ||
*Chomvong, K., Kordic, V., Li, X., Bauer, S., Gillespie. A.E., Ha, S.J., Oh, E.J., Galazka, J.M., Jin, Y.S., Cate, J.H.Overcoming inefficient cellobiose fermentation by cellobiose phosphorylase in the presence of xylose. '''Biotechnology for Biofuels''' [http://www.biotechnologyforbiofuels.com/content/7/1/85/abstract Link] | *Lane, S., Zhang, S., Wei, N., Rao, C., Jin, Y.S. Development and Physiological Characterization of Cellobiose-Consuming ''Yarrowia lipolytica''. '''Biotechnology & Bioengineering''' (accepted) | ||
*Zhang, G., Kong, I.I., Kim, H., Liu, J., Cate, J.H.D., Jin, Y.S. Construction of a quadruple auxotrophic mutant of an industrial polyploidy ''Saccharomyces cerevisiae'' using RNA-guided Cas9 nuclease. '''Applied and Environmental Microbiology''' (in press) [http://aem.asm.org/content/early/2014/09/29/AEM.02310-14.abstract Link] | |||
*Tsai, C.S., Kwak, S., Turner, T.L., Jin, Y.S. Yeast synthetic biology toolbox and applications for biofuel production. '''FEMS Yeast Research''' (accepted) [http://onlinelibrary.wiley.com/doi/10.1111/1567-1364.12206/abstract Link] | |||
*Lin, Y., Chomvong, L., Acosta-Sampson, L., Estrela, R., Galazka, J.M., Kim, S.R., Jin, Y.S., Cate, J.H.D. Leveraging transcription factors to speed cellobiose fermentation by ''Saccharomyces cerevisiae''. '''Biotechnology for Biofuels''' [http://www.biomedcentral.com/content/pdf/s13068-014-0126-6.pdf Link] | |||
*Chomvong, K., Kordic, V., Li, X., Bauer, S., Gillespie. A.E., Ha, S.J., Oh, E.J., Galazka, J.M., Jin, Y.S., Cate, J.H. Overcoming inefficient cellobiose fermentation by cellobiose phosphorylase in the presence of xylose. '''Biotechnology for Biofuels''' [http://www.biotechnologyforbiofuels.com/content/7/1/85/abstract Link] | |||
*Hong, N., Seo, S.S., Oh, E.J., Seo, J.H., Cate, J.H., Jin, Y.S. 2,3-Butanediol production from cellobiose by engineered ''Saccharomyces cerevisiae''. '''Applied Microbiology and Biotechnology''' [http://link.springer.com/article/10.1007/s00253-014-5683-x Link] | *Hong, N., Seo, S.S., Oh, E.J., Seo, J.H., Cate, J.H., Jin, Y.S. 2,3-Butanediol production from cellobiose by engineered ''Saccharomyces cerevisiae''. '''Applied Microbiology and Biotechnology''' [http://link.springer.com/article/10.1007/s00253-014-5683-x Link] | ||
*Kim, S.J., Seo, S.O., Park, Y.C., Jin, Y.S., Seo, J.H. Production of 2,3-Butanediol from xylose by engineered ''Saccharomyces cerevisiae''. '''Journal of Biotechnology''' (in press) | *Kim, S.J., Seo, S.O., Park, Y.C., Jin, Y.S., Seo, J.H. Production of 2,3-Butanediol from xylose by engineered ''Saccharomyces cerevisiae''. '''Journal of Biotechnology''' (in press) [http://www.sciencedirect.com/science/article/pii/S0168165614000352 Link] | ||
===2013=== | ===2013=== | ||
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* Tyo, K.E., Jin, Y.S., Espinoza, F.A. & Stephanopoulos, G. Identification of gene disruptions for increased poly-3-hydroxybutyrate accumulation in ''Synechocystis'' PCC 6803. '''Biotechnol Prog''' 25, 1236-1243 (2009). [http://dx.doi.org/10.1002/btpr.228 Link] | * Tyo, K.E., Jin, Y.S., Espinoza, F.A. & Stephanopoulos, G. Identification of gene disruptions for increased poly-3-hydroxybutyrate accumulation in ''Synechocystis'' PCC 6803. '''Biotechnol Prog''' 25, 1236-1243 (2009). [http://dx.doi.org/10.1002/btpr.228 Link] | ||
* Shin, J.Y., Shin, J.I., Kim, J.S., Yang, Y.S., Hwang, Y., Yang, J.S., Shin, D., Seo, J.H., Jin, Y.S., Park, Y.C., Hwang, J.S. & Kweon, D.H. Assembly of Coenzyme Q10 nanostructure resembling nascent discoidal high density lipoprotein particle. '''Biochem Biophys Res Commun''' 388, 217-221 (2009). [http://www.sciencedirect.com/science/article/pii/S0006291X09015137 Link] | * Shin, J.Y., Shin, J.I., Kim, J.S., Yang, Y.S., Hwang, Y., Yang, J.S., Shin, D., Seo, J.H., Jin, Y.S., Park, Y.C., Hwang, J.S. & Kweon, D.H. Assembly of Coenzyme Q10 nanostructure resembling nascent discoidal high density lipoprotein particle. '''Biochem Biophys Res Commun''' 388, 217-221 (2009). [http://www.sciencedirect.com/science/article/pii/S0006291X09015137 Link] | ||
* Lee, K., Shin, J.Y., Yang, Y.S., Shin, J.I., Park, Y.C., Seo, J.H., Park, T.H., Shin, C.S., Jin, Y.S. & Kweon, D.H. Towards a microarray of functional membrane proteins: Assembly of a surface-attachable, membrane-protein-anchored membrane structure using apolipoprotein A-1. '''Enz. Microb Tech''' 44, 217-222 (2009). | * Lee, K., Shin, J.Y., Yang, Y.S., Shin, J.I., Park, Y.C., Seo, J.H., Park, T.H., Shin, C.S., Jin, Y.S. & Kweon, D.H. Towards a microarray of functional membrane proteins: Assembly of a surface-attachable, membrane-protein-anchored membrane structure using apolipoprotein A-1. '''Enz. Microb Tech''' 44, 217-222 (2009). [http://www.sciencedirect.com/science/article/pii/S0141022908002767 Link] | ||
* Lee, J., Seo, E., Kweon, D.H., Park, K. & Jin, Y.S. Fermentation of rice bran and defatted rice rran for butanol production using Clostridium beijerinckii NCIMB 8052. '''J. Microbiol. Biotechnol.''' 19, 482-490 (2009). | * Lee, J., Seo, E., Kweon, D.H., Park, K. & Jin, Y.S. Fermentation of rice bran and defatted rice rran for butanol production using Clostridium beijerinckii NCIMB 8052. '''J. Microbiol. Biotechnol.''' 19, 482-490 (2009). [http://www.jmb.or.kr/journal/viewJournal.html?year=2009&vol=19&num=5&page=482 Link] | ||
===2008=== | ===2008=== | ||
* Lee, K.S., Chang, E.H., Shin, J.Y., Kweon, D.H., Park, K.M. & Jin, Y.S. Production of casein phosphopeptides using Streptococcus faecalis var. liquefaciens cell immobilization. '''Korean J Biotechnol Bioeng''' 23, 59-64 (2008). | * Lee, K.S., Chang, E.H., Shin, J.Y., Kweon, D.H., Park, K.M. & Jin, Y.S. Production of casein phosphopeptides using Streptococcus faecalis var. liquefaciens cell immobilization. '''Korean J Biotechnol Bioeng''' 23, 59-64 (2008). [http://www.koreascience.or.kr/article/ArticleFullRecord.jsp?cn=KHGSBC_2008_v23n1_59 Link] | ||
* Jung, C.H., Yang, Y.S., Kim, J.S., Shin, J.I., Jin, Y.S., Shin, J.Y., Lee, J.H., Chung, K.M., Hwang, J.S., Oh, J.M., Shin, Y.K. & Kweon, D.H. A search for synthetic peptides that inhibit soluble N-ethylmaleimide sensitive-factor attachment receptor-mediated membrane fusion. '''FEBS J''' 275, 3051-3063 (2008). | * Jung, C.H., Yang, Y.S., Kim, J.S., Shin, J.I., Jin, Y.S., Shin, J.Y., Lee, J.H., Chung, K.M., Hwang, J.S., Oh, J.M., Shin, Y.K. & Kweon, D.H. A search for synthetic peptides that inhibit soluble N-ethylmaleimide sensitive-factor attachment receptor-mediated membrane fusion. '''FEBS J''' 275, 3051-3063 (2008). [http://onlinelibrary.wiley.com/doi/10.1111/j.1742-4658.2008.06458.x/full Link] | ||
===2006-2007=== | ===2006-2007=== | ||
*Jung, S.C., Chung, C.Y., Kim, J.S., Kweon, D.H., Park, K.M. & Jin, Y.S. Policosanol production from rice bran oil byproducts. '''Food Eng Prog''' 11, 293-297 (2007) | *Jung, S.C., Chung, C.Y., Kim, J.S., Kweon, D.H., Park, K.M. & Jin, Y.S. Policosanol production from rice bran oil byproducts. '''Food Eng Prog''' 11, 293-297 (2007) [http://agris.fao.org/agris-search/search.do?recordID=KR2008001949 Link] | ||
* Jin, Y.S. & Stephanopoulos, G. Multi-dimensional gene target search for improving lycopene biosynthesis in Escherichia coli. '''Metab Eng''' 9, 337-347 (2007). | * Jin, Y.S. & Stephanopoulos, G. Multi-dimensional gene target search for improving lycopene biosynthesis in Escherichia coli. '''Metab Eng''' 9, 337-347 (2007). [http://www.sciencedirect.com/science/article/pii/S109671760700016X Link] | ||
* Jeffries, T.W., Grigoriev, I.V., Grimwood, J., Laplaza, J.M., Aerts, A., Salamov, A., Schmutz, J., Lindquist, E., Dehal, P., Shapiro, H., Jin, Y.S., Passoth, V. & Richardson, P.M. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. '''Nat Biotechnol''' 25, 319-326 (2007). | * Jeffries, T.W., Grigoriev, I.V., Grimwood, J., Laplaza, J.M., Aerts, A., Salamov, A., Schmutz, J., Lindquist, E., Dehal, P., Shapiro, H., Jin, Y.S., Passoth, V. & Richardson, P.M. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. '''Nat Biotechnol''' 25, 319-326 (2007). [http://www.nature.com/nbt/journal/v25/n3/abs/nbt1290.html Link] | ||
* Laplaza, J.M., Torres, B.R., Jin, Y.S. & Jeffries, T.W. Sh ble and Cre adapted for functional genomics and metabolic engineering of Pichia stipitis. '''Enz Microb Tech''' 38, 741-747 (2006). | * Laplaza, J.M., Torres, B.R., Jin, Y.S. & Jeffries, T.W. Sh ble and Cre adapted for functional genomics and metabolic engineering of Pichia stipitis. '''Enz Microb Tech''' 38, 741-747 (2006). [http://www.sciencedirect.com/science/article/pii/S0141022905003492 Link] | ||
* Jin, Y.S., Cruz, J. & Jeffries, T.W. Xylitol production by a Pichia stipitis D-xylulokinase mutant. '''Appl Microbiol Biotechnol''' 68, 42-45 (2005). | * Jin, Y.S., Cruz, J. & Jeffries, T.W. Xylitol production by a Pichia stipitis D-xylulokinase mutant. '''Appl Microbiol Biotechnol''' 68, 42-45 (2005). [http://link.springer.com/article/10.1007/s00253-004-1854-5 Link] | ||
* Jin, Y.S., Alper, H., Yang, Y.T. & Stephanopoulos, G. Improvement of xylose uptake and ethanol production in recombinant Saccharomyces cerevisiae through an inverse metabolic engineering approach. '''Appl Environ Microbiol''' 71, 8249-8256 (2005). | * Jin, Y.S., Alper, H., Yang, Y.T. & Stephanopoulos, G. Improvement of xylose uptake and ethanol production in recombinant Saccharomyces cerevisiae through an inverse metabolic engineering approach. '''Appl Environ Microbiol''' 71, 8249-8256 (2005). [http://aem.asm.org/content/71/12/8249.short Link] | ||
* Alper, H., Jin, Y.S., Moxley, J.F. & Stephanopoulos, G. Identifying gene targets for the metabolic engineering of lycopene biosynthesis in Escherichia coli. '''Metab Eng''' 7, 155-164 (2005). | * Alper, H., Jin, Y.S., Moxley, J.F. & Stephanopoulos, G. Identifying gene targets for the metabolic engineering of lycopene biosynthesis in Escherichia coli. '''Metab Eng''' 7, 155-164 (2005). [http://www.sciencedirect.com/science/article/pii/S1096717604000849 Link] | ||
* Jin, Y.S., Laplaza, J.M. & Jeffries, T.W. Saccharomyces cerevisiae engineered for xylose metabolism exhibits a respiratory response. '''Appl Environ Microbiol''' 70, 6816-6825 (2004). | * Jin, Y.S., Laplaza, J.M. & Jeffries, T.W. Saccharomyces cerevisiae engineered for xylose metabolism exhibits a respiratory response. '''Appl Environ Microbiol''' 70, 6816-6825 (2004). [http://aem.asm.org/content/70/11/6816.short Link] | ||
* Jin, Y.S. & Jeffries, T.W. Stoichiometric network constraints on xylose metabolism by recombinant Saccharomyces cerevisiae. '''Metab Eng''' 6, 229-238 (2004). | * Jin, Y.S. & Jeffries, T.W. Stoichiometric network constraints on xylose metabolism by recombinant Saccharomyces cerevisiae. '''Metab Eng''' 6, 229-238 (2004). [http://www.sciencedirect.com/science/article/pii/S1096717604000199 Link] | ||
* Jeffries, T.W. & Jin, Y.S. Metabolic engineering for improved fermentation of pentoses by yeasts. '''Appl Microbiol Biotechnol''' 63, 495-509 (2004). | * Jeffries, T.W. & Jin, Y.S. Metabolic engineering for improved fermentation of pentoses by yeasts. '''Appl Microbiol Biotechnol''' 63, 495-509 (2004). [http://link.springer.com/article/10.1007/s00253-003-1450-0 Link] | ||
* Jin, Y.S., Ni, H., Laplaza, J.M. & Jeffries, T.W. Optimal growth and ethanol production from xylose by recombinant Saccharomyces cerevisiae require moderate D-xylulokinase activity. '''Appl Environ Microbiol''' 69, 495-503 (2003). | * Jin, Y.S., Ni, H., Laplaza, J.M. & Jeffries, T.W. Optimal growth and ethanol production from xylose by recombinant Saccharomyces cerevisiae require moderate D-xylulokinase activity. '''Appl Environ Microbiol''' 69, 495-503 (2003). [http://aem.asm.org/content/69/1/495.short Link] | ||
* Jin, Y.S. & Jeffries, T.W. Changing flux of xylose metabolites by altering expression of xylose reductase and xylitol dehydrogenase in recombinant Saccharomyces cerevisiae. '''Appl Biochem Biotechnol''' 105 -108, 277-286 (2003). | * Jin, Y.S. & Jeffries, T.W. Changing flux of xylose metabolites by altering expression of xylose reductase and xylitol dehydrogenase in recombinant Saccharomyces cerevisiae. '''Appl Biochem Biotechnol''' 105 -108, 277-286 (2003). [http://link.springer.com/article/10.1385/ABAB:106:1-3:277#page-1 Link] | ||
* Jin, Y.S., Jones, S., Shi, N.Q. & Jeffries, T.W. Molecular cloning of XYL3 (D-xylulokinase) from Pichia stipitis and characterization of its physiological function. '''Appl Environ Microbiol''' 68, 1232-1239 (2002). | * Jin, Y.S., Jones, S., Shi, N.Q. & Jeffries, T.W. Molecular cloning of XYL3 (D-xylulokinase) from Pichia stipitis and characterization of its physiological function. '''Appl Environ Microbiol''' 68, 1232-1239 (2002). [http://aem.asm.org/content/68/3/1232.short Link] | ||
* Jin, Y.S., Lee, T.H., Choi, Y.D., Ryu, Y.W. & Seo, J.H. Conversion of xylose to ethanol by recombinant Saccharomyces cerevisiae containing genes for xylose reductase and xylitol dehydrogenase from Pichia stipitis. '''J Microbiol Biotechnol''' 10, 564-567 (2000). | * Jin, Y.S., Lee, T.H., Choi, Y.D., Ryu, Y.W. & Seo, J.H. Conversion of xylose to ethanol by recombinant Saccharomyces cerevisiae containing genes for xylose reductase and xylitol dehydrogenase from Pichia stipitis. '''J Microbiol Biotechnol''' 10, 564-567 (2000). [http://cat.inist.fr/?aModele=afficheN&cpsidt=1483799 Link] | ||
* Jeffries, T.W. & Jin, Y.S. Ethanol and thermotolerance in the bioconversion of xylose by yeasts. '''Adv Appl Microbiol''' 47, 221-268 (2000). | * Jeffries, T.W. & Jin, Y.S. Ethanol and thermotolerance in the bioconversion of xylose by yeasts. '''Adv Appl Microbiol''' 47, 221-268 (2000). [http://www.ncbi.nlm.nih.gov/pubmed/12876799 Link] |
Revision as of 20:32, 18 November 2014
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