Individual Journal Week 12

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(Analyzing and Interpreting STEM Results)
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==Analyzing and Interpreting STEM Results==
==Analyzing and Interpreting STEM Results==
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#Why did you select this profile?  
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*Why did you select this profile?  
**I selected profile 45 because for the first 3 times, it had a pattern of upregulation. The t120 time is clearly downregulated, suggesting a possible response to cold-shock that changes at t120.  
**I selected profile 45 because for the first 3 times, it had a pattern of upregulation. The t120 time is clearly downregulated, suggesting a possible response to cold-shock that changes at t120.  
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#How many genes belong to this profile?
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*How many genes belong to this profile?
**388
**388
*How many genes were expected to belong to this profile?
*How many genes were expected to belong to this profile?

Revision as of 23:29, 11 April 2013

Analyzing and Interpreting STEM Results

  • Why did you select this profile?
    • I selected profile 45 because for the first 3 times, it had a pattern of upregulation. The t120 time is clearly downregulated, suggesting a possible response to cold-shock that changes at t120.
  • How many genes belong to this profile?
    • 388
  • How many genes were expected to belong to this profile?
    • 46.9
  • What is the p value for the enrichment of genes in this profile?
    • p=2.3E-224
  • How many GO terms are associated with this profile at p<0.05?
    • 165
  • How many GO terms are associated with this profile with a corrected p value <0.05?
    • 35
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