Imperial College/Courses/Spring2008/Synthetic Biology/Computer Modelling Practicals

From OpenWetWare
Jump to navigationJump to search
The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.
Synthetic Biology (Spring2008): Computer Modelling Practicals

Home        CellDesigner Tutorial        Practical 1        Practical 2        Practical 3        Schedule        Back to Synthetic Biology Course       

<html> <body> <!-- Start of StatCounter Code --> <script type="text/javascript"> var sc_project=3315875; var sc_invisible=0; var sc_partition=36; var sc_security="779debd0"; </script> <script type="text/javascript" src="http://www.statcounter.com/counter/counter_xhtml.js"></script><noscript><div class="statcounter"><a class="statcounter" href="http://www.statcounter.com/"><img class="statcounter" src="http://c37.statcounter.com/3315875/0/779debd0/0/" alt="web metrics" /></a></div></noscript> <!-- End of StatCounter Code --> </body> </html>

Spring 2008

Instructor: Vincent Rouilly, Geoff Baldwin.

Room: Biochemistry building, 310.

Welcome!

Announcements

  • Vincent 04:06, 15 January 2008 (CST): Computer Lab, planned on Tuesday 15th Jan POSTPONED . Computer Lab on Thursday 17th Jan (9-12), CONFIRMED
  • Registration to OpenWetWare required (Join OWW)
  • You can find old announcements here

Computer Lab Overview

Practical 1: Introduction (3h)

  • Short Presentation: "All the models are wrong, but some of them are useful", George Box.
  • Short Presentation: CellDesigner Crash Course
    • Features and GUI
    • Kinetic Simulations
    • SBML
  • Hands-on: Build your first kinetic models.

Practical 2: Gene Expression Modelling (3h)

  • Constitutive Gene Expression
  • Activated and Repressed Gene Expression
  • Positive and Negative Feedback Gene Expression

Practical 3: Genetic Circuit Modelling (3h)

  • Genetic Inverter Characterisation
  • Repressilator Characterisation
  • Mystery Device Characterisation
Retrieved from "https://openwetware.org/mediawiki/index.php?title=Imperial_College/Courses/Spring2008/Synthetic_Biology/Computer_Modelling_Practicals&oldid=178958"