IGEM:Melbourne/2008/BCModelling/ModelDevelopment

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*''connections'' - this is the first part of the modelling to get the connections right both biologically and theoretically. Jason and Dave are doing this for the linear and binary model respectively. Include as much as possible, remember to employ special cases to be able to simplify the model when necessary and ensure complexity when required.  
*''connections'' - this is the first part of the modelling to get the connections right both biologically and theoretically. Jason and Dave are doing this for the linear and binary model respectively. Include as much as possible, remember to employ special cases to be able to simplify the model when necessary and ensure complexity when required.  
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*''parameters''  - obtain the right parameters for Hill functions, Kd, degradation rates, RL/RK binding constants, and other parameters for more complex models (such as [shae 1985|shae 1985], statisical mechanics model for promoter activity)
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*''parameters''  - obtain the right parameters for Hill functions, Kd, degradation rates, RL/RK binding constants, and other parameters for more complex models (such as [REFshae 1985|shae 1985], statisical mechanics model for promoter activity)
*''break apart'' - need to obtain  
*''break apart'' - need to obtain  

Revision as of 07:52, 16 May 2008

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Calibration

Strategy for completion described below

  • connections - this is the first part of the modelling to get the connections right both biologically and theoretically. Jason and Dave are doing this for the linear and binary model respectively. Include as much as possible, remember to employ special cases to be able to simplify the model when necessary and ensure complexity when required.
  • parameters - obtain the right parameters for Hill functions, Kd, degradation rates, RL/RK binding constants, and other parameters for more complex models (such as [REFshae 1985|shae 1985], statisical mechanics model for promoter activity)
  • break apart - need to obtain
  • iterate


  • real
  • ideal
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