IGEM:Imperial/2010/Modelling
From OpenWetWare
Have a look at this link: Synthetic Biology (Spring2008): Computer Modelling Practicals
Example on how Valencia 2006 team used SimulLink to simulate their project: Valencia 2006 PowerPoint presentation
Output amplification
Is it better to use TEV all the way or HIV1? Modelling should allows us to take decision which design is more efficient. If taken further, it will allow us to determine number of amplification steps that are most favourable.
Kinetic constants
Quality | GFP | TEV |
---|---|---|
Km and Kcat | Doesn't apply | TEV constants (Km and kcat) |
half-life or degradation rate | Half-life of GFP in Bacillus = 1.5 hours - ref. Chris | ? |
production rate in B.sub | ? | ? |