IGEM:Imperial/2010/Modelling

From OpenWetWare

(Difference between revisions)
Jump to: navigation, search
(Model based on Law of Mass Action)
Line 32: Line 32:
==[http://www.openwetware.org/wiki/IGEM:Imperial/2010/Experiments1 Experiments for the Output Amplification Model]==
==[http://www.openwetware.org/wiki/IGEM:Imperial/2010/Experiments1 Experiments for the Output Amplification Model]==
==[http://www.openwetware.org/wiki/IGEM:Imperial/2010/Experiments2 Experiments for the Protein Display Model]==
==[http://www.openwetware.org/wiki/IGEM:Imperial/2010/Experiments2 Experiments for the Protein Display Model]==
 +
 +
 +
<html>
 +
<head>
 +
 +
<script type="text/javascript" src="jquery.js"></script>
 +
<script type="text/javascript">
 +
$(document).ready(function(){
 +
$(".flip").click(function(){
 +
    $(".panel").slideToggle("slow");
 +
  });
 +
});
 +
</script>
 +
 +
<style type="text/css">
 +
div.panel,p.flip
 +
{
 +
margin:0px;
 +
padding:5px;
 +
text-align:center;
 +
background:#e5eecc;
 +
border:solid 1px #c3c3c3;
 +
}
 +
div.panel
 +
{
 +
height:120px;
 +
display:none;
 +
}
 +
</style>
 +
</head>
 +
 +
<body>
 +
 +
<div class="panel">
 +
<p>Because time is valuable, we deliver quick and easy learning.</p>
 +
<p>At W3Schools, you can study everything you need to learn, in an accessible and handy format.</p>
 +
</div>
 +
 +
<p class="flip">Show/Hide</p>
 +
 +
</body>
 +
</html>

Revision as of 12:27, 7 September 2010

Contents

Objectives

These are our daily objectives.

Output Amplification Model

Model based on Michaelis Menten Kinetics

Comparison between different amplification models (HIV1 and TEV) based on Michaelis Menten kinetics. However, Michaelis Menten kinetics does not apply to our system. Therefore, it had to be modelled from first principle (see below using law of mass action).

Model using HIV1
Model using HIV1
Model using TEV
Model using TEV

Model based on Law of Mass Action

Comparison between these 3 different models (which are based on the law of mass action): Simple production, 1-step and 2-step amplification

Simple production of Dioxygenase
Simple production of Dioxygenase
1-step amplification
1-step amplification
2-step amplification
2-step amplification

Variables and Constants for this Model

Here are the variables and constants that are used in the Output Amplification Model.

Protein Display Model

Protein Display Model

This is a model showing when the ComD receptor will be activated (after proteins have been cleaved).

Variables and constants for this Model

Here are the variables and constants that are used in the Protein Display Model.

Feedback from Wetlab

Experiments for the Output Amplification Model

Experiments for the Protein Display Model

Because time is valuable, we deliver quick and easy learning.

At W3Schools, you can study everything you need to learn, in an accessible and handy format.

Show/Hide

Personal tools