IGEM:Harvard/2007/Laboratory Notebooks/Two Component System: Difference between revisions
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SV006 - FecI plus VR | SV006 - FecI plus VR | ||
PCR extension of constructs 1 and 2<br> | |||
-3 cycles of PCR<br> | |||
-diluted first to 500 uM, then to 20 uM<br> | |||
-15 uL of water, 10 uL of DNA, 25 uL of PCR master mix for each.<br> | |||
-two redundant reactions, R1 and R2<br> | |||
-R2 may be wrong becuase of volume errors<br> | |||
Insert site directed mutagenesis stuff here | Insert site directed mutagenesis stuff here | ||
7/9/07<br> | 7/9/07<br> |
Revision as of 14:18, 9 July 2007
6/27/07 - Ordered oligos to create a FecA promoter BioBrick that can be used to recombine with GFP to create a reporter system.
The oligos ordered were as follows:
Construct 1 5’- GTTTCTTCGAATTCGCGGCCGCTTCTAGAGatttcaccactgtaaggaaaataattcttatttc – 3’
Construct 2 5’- GTTTCTTCCTGCAGCGGCCGCTACTAGTAAGGGTAAAAAGGACAATCGAAATAAGAATTATTT – 3’
6/27/07 - Grew bacteria (FecA, FecI, FecR) in liquid culture to prepare for sequencing tomorrow, inoculation in 2 ml LB and 2 ul amp 50mg/ml 1000x.
[edit]
6/28/07 - Miniprepped to prepare for sequencing, nanodropped to confirm presence of DNA, sequencing rxns:
SV001 - FecA plus VF2
SV002 - FecA plus VR
SV003 - FecR plus VF2
SV004 - FecR plus VR
SV005 - FecI plus VF2
SV006 - FecI plus VR
PCR extension of constructs 1 and 2
-3 cycles of PCR
-diluted first to 500 uM, then to 20 uM
-15 uL of water, 10 uL of DNA, 25 uL of PCR master mix for each.
-two redundant reactions, R1 and R2
-R2 may be wrong becuase of volume errors
Insert site directed mutagenesis stuff here
7/9/07
-miniprep of site directed mutagenesis using QiaGen Miniprep kit
-purification of construct C1+C2 extension rxn R1 using QiaGen PCR purification protocol--labeled product 'FecA promoter biobrick'
-received E Coli AA93, plasmid pLCIRA, pGFPA' from Germany, waiting on instructions from Dr. Braun on how to plate them.
-grow E0240 in liquid culture