Haynes Lab:Notebook/Synthetic Biology and Bioinformatics for Predictable Control of Therapeutic Genes/2012/06/06: Difference between revisions

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==Edited Data==
==Edited Data==
*MYT1 is known to be highly methylated, however, not so much at the promoter. Therefore, we will bump signal value up for BJ and HUVEC up to 3 and 5 respectively
*MYT1 is known to be highly methylated, however, not so much at the promoter. Therefore, we will bump signal value up for BJ and HUVEC up to 3 and 5 respectively
*Because many HUVEC gene are silenced until later on in life, we may be able to assume that the HUVEC specific genes will be activated as they mature (it's a good assumption to make since the amount of HUVEC specific genes equal that of the BJ specific)  
*Because many HUVEC gene are not silenced until later on in life, we may be able to assume that the HUVEC specific genes will be silenced as they mature (it's a good assumption to make since the amount of HUVEC specific genes equal that of the BJ specific). This tells us, because the promoter regions returned are about equal, that the filter was set correctly


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New Venn Diagram Results:<br>

Revision as of 09:22, 7 June 2012

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Edited Data

  • MYT1 is known to be highly methylated, however, not so much at the promoter. Therefore, we will bump signal value up for BJ and HUVEC up to 3 and 5 respectively
  • Because many HUVEC gene are not silenced until later on in life, we may be able to assume that the HUVEC specific genes will be silenced as they mature (it's a good assumption to make since the amount of HUVEC specific genes equal that of the BJ specific). This tells us, because the promoter regions returned are about equal, that the filter was set correctly

New Venn Diagram Results: