Haynes Lab:Notebook/Engineering PC-TFs/2013/09/12: Difference between revisions

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|   || 30 μL --> 37°C/ ~10 min.
|   || 30 μL --> 37°C/ ~10 min.
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{|border="1" cellpadding="5" cellspacing="0" align="left"
|-
! scope="col" style="background:#efefef;" | #
! scope="col" style="background:#efefef;" | Biobrick
! scope="col" style="background:#efefef;" | ng/µL
|-
|1
|hPCD : mCh : SP1AB (BL01)
|18.834
|-
|2
|fshPCD : mCh : SP1AB (BL05)
|14.471
|-
|3
|flyPCD : mCh : SP1A (BL09)
|7.302
|-
|4
|hPCD : BL01 (BL12)
|10.84
|-
|}
|}


Revision as of 20:18, 13 September 2013



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Summary

  • Follow steps for gel electrophoresis.
  • Orient top notch of gel electrophoresis apparatus. Place gel tray into larger tray.
  • Fill gel flask with up to 60 ml of TA buffer.
  • Create 1% gel by putting .6 grams of agarose into flask.
  • Microwave agarose solution for 40 seconds
  • Using hot gloves, grab flask out of microwave and swirl flask vigorously. Place back in microwave for 40 more seconds.
  • When flask is taken out of microwave, make sure that the agarose is completed dissolved.
  • Set up wells on gel electrophoresis apparatus. The mold for the first digest is B-10. Use the thick "teeth" and slip in the notches.
  • Add EtBr (ethidium bromide) to the agarose gel. There should be 1 microliter of EtBr per 10ml of agarose gel. Therefore, 6 µL.
  • Pour gel into tray.
  • Wash the agarose gel flask.
  • Run gel for 45 min at 100 V. Check gel under UV light.
Reagent Volume CMV and MV9 Stock digest CMV and MV9 Stock Digest 3/18/2013
30 μL/lane, 1% agarose; Ladder
DNA (plasmid) 20.0 μL
SpeI 1.0 μL
PstI 1.0 μL
Green 10x FastDigest buffer 3.0 μL
dH2O 5 μL
  30 μL --> 37°C/ ~10 min.
# Biobrick ng/µL
1 hPCD : mCh : SP1AB (BL01) 18.834
2 fshPCD : mCh : SP1AB (BL05) 14.471
3 flyPCD : mCh : SP1A (BL09) 7.302
4 hPCD : BL01 (BL12) 10.84


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