Haynes Lab:Notebook/Engineering PC-TFs/2013/02/09

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==Summary==
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==2/9/2013==
* Type IIS assembly - PCR products
* Type IIS assembly - PCR products
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Purification (Completed on 1-25-2013)
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Purification (Completed on 2-09-2013)
* Clean with Zymo DNA clean &concentrator kit; eluted w/ 20 μL dH<sub>2</sub>O  
* Clean with Zymo DNA clean &concentrator kit; eluted w/ 20 μL dH<sub>2</sub>O  

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2/9/2013

  • Type IIS assembly - PCR products


PCR

  • Resuspend new primers to a final concentration of 100 μM
  • Make 10 μM dilutions in separate tubes
  • All of the reactions are as follows:
  1. pSB1A3, gg0001, gg0002
  2. hPCD, gg0003, gg0004
  3. BL02, gg0005, gg0007
  4. BL03, gg0005, gg0008
  5. BL04, gg0005, gg0009


Reagent Volume Expected:
1. pSB1A3 = ~2000
2. hPCD = 186
3. BL02 = 1431
4. BL03 = 1731
5. BL04 = 1686 		PCR results
10 μL/lane; 1% agarose; Ladder
DNA(plasmid) 0.2 μL
primer 1 1.0
primer 2 1.0
2x GoTaq 25.0
dH2O 22.8
  50.0 μL
  • 95°C, 3 min.
  • [95°C, 30 sec.; 57°C, 30 sec.; 72°C, 1 min.] x35
  • 72°C, 3 min.
  • 4°C, ∞


Purification (Completed on 2-09-2013)

  • Clean with Zymo DNA clean &concentrator kit; eluted w/ 20 μL dH2O
  • Measure [DNA] (1-29-2013)
Sample OD 260 260/280 ng/μL
1. pSB1A3 .079 1.837 79.379
2. hPCD .022 1.883 22.239
3. BL02 .129 1.883 128.889
4. BL03 .079 1.918 78.72
5. BL04 .06 1.879 59.912



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