05/27/2015
Redo qPCR with the right control primers
Dilutions for 2ng gDNA per well:
Tube label
|
Cell type
|
gRNA
|
plasmid 2
|
ug DNA
|
ul lipo
|
rep
|
ng/µL
|
dilute 1:20
|
ul dilution
|
ul water
|
1 |
Gal4-EED |
g034 |
- |
0.5 |
3 |
1 |
81.058 |
4.05 |
1.73 |
14.02
|
2 |
Gal4-EED |
g034 |
- |
0.5 |
3 |
2 |
86.697 |
4.33 |
1.61 |
14.14
|
3 |
Gal4-EED |
g034 |
- |
0.5 |
5 |
1 |
23.89 |
1.19 |
5.86 |
9.89
|
4 |
Gal4-EED |
g034 |
- |
0.5 |
5 |
2 |
24.767 |
1.24 |
5.65 |
10.10
|
5 |
Gal4-EED |
g034 |
- |
1 |
3 |
1 |
85.32 |
4.27 |
1.64 |
14.11
|
6 |
Gal4-EED |
g034 |
- |
1 |
3 |
2 |
70.244 |
3.51 |
1.99 |
13.76
|
7 |
Gal4-EED |
g034 |
- |
1 |
5 |
1 |
13.387 |
0.67 |
10.46 |
5.29
|
8 |
Gal4-EED |
g034 |
- |
1 |
5 |
2 |
23.213 |
1.16 |
6.03 |
9.72
|
9 |
Luc14 |
g034 |
GFP |
- |
- |
1 |
104.239 |
5.21 |
1.34 |
14.41
|
10 |
Luc14 |
g034 |
GFP |
- |
- |
2 |
64.965 |
3.25 |
2.16 |
13.59
|
11 |
Luc14 |
g034 |
GFP |
- |
- |
3 |
39.096 |
1.95 |
3.58 |
12.17
|
12 |
Gal4-EED+dox |
g034 |
GFP |
- |
- |
1 |
160 |
8 |
0.88 |
14.88
|
13 |
Gal4-EED+dox |
g034 |
GFP |
- |
- |
2 |
129 |
6.45 |
1.09 |
14.66
|
14 |
Gal4-EED+dox |
g034 |
GFP |
- |
- |
3 |
132 |
6.6 |
1.06 |
14.69
|
15 |
water |
- |
- |
- |
- |
- |
- |
- |
- |
15.75
|
Step 2: make primer master mixes. Will have to add 3.5x to each triplicate gDNA tube so can calculate mastermixes from that
14 samples, 1 tube for no template control, total of 15 tubes per primer.
'
|
1rxn
|
3.5/triplicate tube
|
15.7
|
primer |
3 |
10.5 |
164.85
|
SYBR |
7.5 |
26.25 |
412.125
|
Total |
10.5 |
36.75 |
576.975
|
Make these mixes for each primer pair, add 36.75 to each triplicate tube, then pipette 15ul into 3 well of the plate.
|