Harvard:Biophysics 101/2007/02/22: Difference between revisions

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(specification for Feb 13 assignment)
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Revision as of 16:30, 22 February 2007

Required feature set

  • Your program should be able to recognize and report the following at a minimum
    • Nucleic acid point mutations (silent vs non-silent with corresponding amino acid change)
    • Nucleic acid deletions (frame shift vs non-frame shift, with amino acid position where change occurred)
    • Nucleic acid insertions (frame shift vs non-frame shift, with amino acid position where change occurred)
    • Detailed reporting of significant amino acid changes (stop codon, ±cysteine, ±charged, hydrophobic ↔ hydrophilic)