Galaxy at MIT: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
No edit summary
Line 31: Line 31:


= The solution of Data Deletion =
= The solution of Data Deletion =
The script for [[galaxy_dataset_deletion | deleting datasets]] stored on Galaxy server after a user's history and datasets have been deleted using Galaxy web interface.

Revision as of 11:33, 29 July 2011

  1. Galaxy at MIT is a GALAXY INSTANCE installed at MIT.

Project Timelines

Schedule
Timelines Plan Status Comments
Jul 29 Galaxy Setup: Finish tweaking the installation and configuration of Galaxy at MIT instance. (1) The solution for data transfer among user computer, data server and Galaxy server; (2) The solution for data maintenance on Galaxy server; (3) Local or network source code repository. Add your comment
Aug 5 Chip-Seq Pipeline: Test the Chip-Seq pipeline in Galaxy. Ongoing Add your comment
Aug 12 Chip-Seq Pipeline: Start some of the analyses on Boyer Lab data using Galaxy. Ongoing Add your comment
Aug 31 Chip-Seq Pipeline: Make the Chip-Seq analytical pipeline in Galaxy available to users. Ongoing Add your comment
Oct 31 Other Pipelines: Test some other pipelines such as RNA-Seq, CNV, whole genome etc in Galaxy. Ongoing Add your comment
Dec 31 Galaxy and GenePattern: Comparison of features and analytical pipelines in Galaxy and GenePattern for better performance and usability. Ongoing Add your comments

The Solution of Data Uploading

The Solution of Data Maintenance

The solution of Data Deletion

The script for deleting datasets stored on Galaxy server after a user's history and datasets have been deleted using Galaxy web interface.