GRNmap Testing Report Identical Runs with Same Code Version and Same Input Workbook 2015-06-01: Difference between revisions
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(Add name LSE, penalty term, iterations, counter for cop1) |
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== Results == | == Results == | ||
*4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1 | |||
*4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy- | |||
**[[Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1.xlsx]] | **[[Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1.xlsx]] | ||
**[[Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1_output.xlsx]] | **[[Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1_output.xlsx]] | ||
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** Penalty term: 13.6109 | ** Penalty term: 13.6109 | ||
** Number of iterations: 12900 | ** Number of iterations: 12900 | ||
*4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2 | |||
**[[Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2.xlsx]] | |||
**[[Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2_output.xlsx]] | |||
**[[Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2_output.mat]] | |||
**[[Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2_plots.zip]] | |||
** LSE: 3.5295e-08 | |||
** Penalty term: 13.6109 | |||
** Number of iterations: 12900 | |||
*4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1 | |||
**[[Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1.xlsx]] | |||
**[[Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1_output.xlsx]] | |||
**[[Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1_output.mat]] | |||
**[[Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1_plots.zip]] | |||
**LSE: 0.1077 | |||
**Penalty term: 63.1164 | |||
**Number of iterations: 8700 | |||
*4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2 | |||
**[[Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2.xlsx]] | |||
**[[Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2_output.xlsx]] | |||
**[[Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2_output.mat]] | |||
**[[Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2_plots.zip]] | |||
**LSE: 0.1077 | |||
**Penalty term: 63.1164 | |||
**Number of iterations: 8700 | |||
*[[Media:GRNmap Testing Report Identical Runs with Same Code Version and Same Input Workbook analysis 2015-06-02.xlsx| Analysis Workbook]] | |||
== Discussion == | == Discussion == | ||
* | *The LSE, Penalty term, and the counter are the same between the two copies. | ||
* | *The difference between the network_optimized_weights, optimized_production_rates, and optimized_threshold_b values of two copies of the Sigmoidal_estimation_fixb-0_fixP-0_graph was zero. | ||
*The difference between the network_optimized_weights and optimized_production_rates values of two copies of the MM_estimation_fixP-0_graph was zero (no sheet for optimized_threshold_b). | |||
* | |||
[[Category:GRNmap]] | [[Category:GRNmap]] | ||
[[Category:Dahlquist Lab]] | [[Category:Dahlquist Lab]] |
Latest revision as of 16:19, 2 June 2015
Test Conditions
- Date: 2015-06-02
- Test Performed by: Tessa A. Morris, Electronic Notebook
- Code Version: Current version of GRNmap-beta as of 2:30 pm 2015-06-02
- MATLAB Version: 2014b
- Computer on which the model was run: Row 2 4th from door
Purpose
- The purpose of this test was to compare successive identical runs with same version code and same input workbook to make sure that they are the same.
- Issue 99
Results
- 4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1
- Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1.xlsx
- Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1_output.xlsx
- Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1_output.mat
- Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-1_plots.zip
- LSE: 3.5295e-08
- Penalty term: 13.6109
- Number of iterations: 12900
- 4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2
- Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2.xlsx
- Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2_output.xlsx
- Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2_output.mat
- Media:4-genes_6-edges_artificial-data_Sigmoidal_estimation_fixb-0_fixP-0_graph_copy-2_plots.zip
- LSE: 3.5295e-08
- Penalty term: 13.6109
- Number of iterations: 12900
- 4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1
- Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1.xlsx
- Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1_output.xlsx
- Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1_output.mat
- Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-1_plots.zip
- LSE: 0.1077
- Penalty term: 63.1164
- Number of iterations: 8700
- 4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2
- Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2.xlsx
- Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2_output.xlsx
- Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2_output.mat
- Media:4-genes_6-edges_artificial-data_MM_estimation_fixP-0_graph_copy-2_plots.zip
- LSE: 0.1077
- Penalty term: 63.1164
- Number of iterations: 8700
- Analysis Workbook
Discussion
- The LSE, Penalty term, and the counter are the same between the two copies.
- The difference between the network_optimized_weights, optimized_production_rates, and optimized_threshold_b values of two copies of the Sigmoidal_estimation_fixb-0_fixP-0_graph was zero.
- The difference between the network_optimized_weights and optimized_production_rates values of two copies of the MM_estimation_fixP-0_graph was zero (no sheet for optimized_threshold_b).