GRNmap Testing Report: Strain Run Comparisons 2015-05-27: Difference between revisions
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(Included information in how to get the LSE and penalty terms) |
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Computer on which the model was run: SEA120-02 and SEA120-03 | Computer on which the model was run: SEA120-02 and SEA120-03 | ||
To get the LSE & the penalty term, type the following: | |||
Code for LSE: | |||
GRNstruct.GRNOutput.lse_out | |||
Code for Penalty | |||
GRNstruct.GRNOutput.reg_out | |||
==wt alone== | ==wt alone== |
Revision as of 10:14, 27 May 2015
Code Version: v1.0
MATLAB Version: 2014b
Computer on which the model was run: SEA120-02 and SEA120-03
To get the LSE & the penalty term, type the following:
Code for LSE: GRNstruct.GRNOutput.lse_out Code for Penalty GRNstruct.GRNOutput.reg_out
wt alone
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
dCIN5 alone
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
dGLN3 alone
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
dHMO1 alone
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
dZAP1 alone
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
all strains
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
wt vs. dCIN5
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
wt vs. dGLN3
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
wt vs. dHMO1
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
wt vs. dZAP1
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
wt + dCIN5 + dZAP1
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
wt + dCIN5 + dZAP1 + dGLN3
- input.xlsx
- output.xlsx
- zipped figures
- analysis.xlsx containing bar graphs
- LSE:
- Penalty term:
Results and Discussion
- What other questions should be answered to help us further analyze the data?