Endy:Reprints - Revision history

Endy at 16:37, 15 May 2013

Endy — Wed, 15 May 2013 16:37:35 GMT

←Older revision		Revision as of 16:37, 15 May 2013
Line 240:		Line 240:
	'''2003 Synthetic Biology study'''<br>		'''2003 Synthetic Biology study'''<br>
	''DARPA ISAT Study'' & briefing to Director, October 2003<br>		''DARPA ISAT Study'' & briefing to Director, October 2003<br>
-	[[Drew Endy]], Pat Lincoln, Richard Murray	+	[[Drew Endy]], Pat Lincoln, Richard Murray<br>
	[[doi:1721.1/38455]]		[[doi:1721.1/38455]]

Endy at 16:37, 15 May 2013

Endy — Wed, 15 May 2013 16:37:15 GMT

←Older revision		Revision as of 16:37, 15 May 2013
Line 239:		Line 239:

	'''2003 Synthetic Biology study'''<br>		'''2003 Synthetic Biology study'''<br>
-	''~~US Government~~'' October 2003<br>	+	''DARPA ISAT Study'' & briefing to Director, October 2003<br>
-	[[Drew Endy]], ~~Patrick~~ Lincoln, Richard Murray~~<br>~~	+	[[Drew Endy]], Pat Lincoln, Richard Murray
	[[doi:1721.1/38455]]		[[doi:1721.1/38455]]

Line 252:		Line 252:
	Alice Y. Ting and [[Drew Endy]]<br>		Alice Y. Ting and [[Drew Endy]]<br>
	[http://openwetware.mit.edu/images/5/5f/1189.pdf PDF reprint]		[http://openwetware.mit.edu/images/5/5f/1189.pdf PDF reprint]
-
-	~~'''2003 Synthetic Biology study'''<br>~~
-	~~''DARPA ISAT Study & briefing to Director'' October 2003<br>~~
-	~~[[Drew Endy]], Pat Lincoln, Richard Murray~~
-	~~[[doi:1721.1/38455]]~~

	'''A standard parts list for biological circuitry'''<br>		'''A standard parts list for biological circuitry'''<br>

Endy at 16:36, 15 May 2013

Endy — Wed, 15 May 2013 16:36:04 GMT

←Older revision		Revision as of 16:36, 15 May 2013
Line 252:		Line 252:
	Alice Y. Ting and [[Drew Endy]]<br>		Alice Y. Ting and [[Drew Endy]]<br>
	[http://openwetware.mit.edu/images/5/5f/1189.pdf PDF reprint]		[http://openwetware.mit.edu/images/5/5f/1189.pdf PDF reprint]
		+
		+	'''2003 Synthetic Biology study'''<br>
		+	''DARPA ISAT Study & briefing to Director'' October 2003<br>
		+	[[Drew Endy]], Pat Lincoln, Richard Murray
		+	[[doi:1721.1/38455]]

	'''A standard parts list for biological circuitry'''<br>		'''A standard parts list for biological circuitry'''<br>

Endy: /* Books */

Endy — Mon, 13 May 2013 22:33:03 GMT

Books

←Older revision		Revision as of 22:33, 13 May 2013
Line 260:		Line 260:
	===Books===		===Books===
	'''Synthetic Aesthetics: Investigating Synthetic Biology's Designs on Nature'''<br>		'''Synthetic Aesthetics: Investigating Synthetic Biology's Designs on Nature'''<br>
-	''MIT Press'' (in press, 2013/2014)<br>	+	''MIT Press'', in press, 2013/2014<br>
	Alexandra Daisy Ginsberg, Jane Calvert, Pablo Schyfter, Alistair Elfick, [[Drew Endy]]<br>		Alexandra Daisy Ginsberg, Jane Calvert, Pablo Schyfter, Alistair Elfick, [[Drew Endy]]<br>

Endy: /* Books */

Endy — Mon, 13 May 2013 22:32:39 GMT

Books

←Older revision		Revision as of 22:32, 13 May 2013
Line 259:		Line 259:

	===Books===		===Books===
		+	'''Synthetic Aesthetics: Investigating Synthetic Biology's Designs on Nature'''<br>
		+	''MIT Press'' (in press, 2013/2014)<br>
		+	Alexandra Daisy Ginsberg, Jane Calvert, Pablo Schyfter, Alistair Elfick, [[Drew Endy]]<br>
		+
	'''Adventures in synthetic biology'''<br>		'''Adventures in synthetic biology'''<br>
	''Nature'' 24 November 2005 Cover & Online<br>		''Nature'' 24 November 2005 Cover & Online<br>

Endy: /* Peer Reviewed Research Articles */

Endy — Mon, 13 May 2013 22:30:45 GMT

Peer Reviewed Research Articles

←Older revision		Revision as of 22:30, 13 May 2013
Line 63:		Line 63:
	''Science,'' 28 March 2013, doi: 10.1126/science.1232758 <br>		''Science,'' 28 March 2013, doi: 10.1126/science.1232758 <br>
	Jerome Bonnet, Peter Yin, Monica E. Ortiz, Pakpoom Subsoontorn, [[Drew Endy]]<br>		Jerome Bonnet, Peter Yin, Monica E. Ortiz, Pakpoom Subsoontorn, [[Drew Endy]]<br>
-	[http://www.sciencemag.org/content/340/6132/599 URL]~~<br>~~	+	[http://www.sciencemag.org/content/340/6132/599 URL] [http://www.npr.org/2013/03/29/175604770/tiny-dna-switches-aim-to-revolutionize-cellular-computing NPR] [http://youtu.be/ahYZBeP_r5U YouTube primer]
-	[http://www.npr.org/2013/03/29/175604770/tiny-dna-switches-aim-to-revolutionize-cellular-computing NPR] [http://youtu.be/ahYZBeP_r5U YouTube primer]	+

	'''Measurement and modeling of intrinsic transcription terminators'''<br>		'''Measurement and modeling of intrinsic transcription terminators'''<br>
Line 77:		Line 76:

	'''Quantitative estimation of activity and quality for collections of functional genetic elements.'''<br>		'''Quantitative estimation of activity and quality for collections of functional genetic elements.'''<br>
-	''Nature Methods,'' ~~in press~~<br>	+	''Nature Methods,'' 10,347–353 (2013), doi:10.1038/nmeth.2403<br>
	Vivek K Mutalik, Joao C Guimaraes, Guillaume Cambray, Quynh-Anh Mai, Marc Juul Christoffersen, Lance Martin, Ayumi Yu, Colin Lam, Cesar Rodriguez, Gaymon Bennett, Jay D Keasling, [[Drew Endy]],Adam P Arkin<br>		Vivek K Mutalik, Joao C Guimaraes, Guillaume Cambray, Quynh-Anh Mai, Marc Juul Christoffersen, Lance Martin, Ayumi Yu, Colin Lam, Cesar Rodriguez, Gaymon Bennett, Jay D Keasling, [[Drew Endy]],Adam P Arkin<br>
	[http://www.nature.com/nmeth/journal/v10/n4/full/nmeth.2403.html URL]<br>		[http://www.nature.com/nmeth/journal/v10/n4/full/nmeth.2403.html URL]<br>

Endy: /* Peer Reviewed Research Articles */

Endy — Mon, 13 May 2013 22:28:37 GMT

Peer Reviewed Research Articles

←Older revision		Revision as of 22:28, 13 May 2013
Line 63:		Line 63:
	''Science,'' 28 March 2013, doi: 10.1126/science.1232758 <br>		''Science,'' 28 March 2013, doi: 10.1126/science.1232758 <br>
	Jerome Bonnet, Peter Yin, Monica E. Ortiz, Pakpoom Subsoontorn, [[Drew Endy]]<br>		Jerome Bonnet, Peter Yin, Monica E. Ortiz, Pakpoom Subsoontorn, [[Drew Endy]]<br>
-	[http://www.sciencemag.org/content/340/6132/599 URL~~] [[Media: \| PDF reprint]~~]<br>	+	[http://www.sciencemag.org/content/340/6132/599 URL]<br>
	[http://www.npr.org/2013/03/29/175604770/tiny-dna-switches-aim-to-revolutionize-cellular-computing NPR] [http://youtu.be/ahYZBeP_r5U YouTube primer]		[http://www.npr.org/2013/03/29/175604770/tiny-dna-switches-aim-to-revolutionize-cellular-computing NPR] [http://youtu.be/ahYZBeP_r5U YouTube primer]

Line 72:		Line 72:

	'''Precise and reliable gene expression via standard transcription and translation initiation elements'''<br>		'''Precise and reliable gene expression via standard transcription and translation initiation elements'''<br>
-	''Nature Methods,'' ~~in press~~<br>	+	''Nature Methods,'' 10,354–360 (2013), doi:10.1038/nmeth.2404<br>
-	Vivek Mutalik ~~et al.~~<br>	+	Vivek K Mutalik, Joao C Guimaraes, Guillaume Cambray, Colin Lam, Marc Juul Christoffersen, Quynh-Anh Mai, Andrew B Tran, Morgan Paull, Jay D Keasling, Adam P Arkin, [[Drew Endy]]<br>
-	[http://www.nature.com ~~URL pending] [http:~~//~~www~~.~~nature~~.~~com/\| PDF reprint pending~~]	+	[http://www.nature.com/nmeth/journal/v10/n4/full/nmeth.2404.html URL]<br>

	'''Quantitative estimation of activity and quality for collections of functional genetic elements.'''<br>		'''Quantitative estimation of activity and quality for collections of functional genetic elements.'''<br>
	''Nature Methods,'' in press<br>		''Nature Methods,'' in press<br>
-	Vivek Mutalik ~~et al.~~<br>	+	Vivek K Mutalik, Joao C Guimaraes, Guillaume Cambray, Quynh-Anh Mai, Marc Juul Christoffersen, Lance Martin, Ayumi Yu, Colin Lam, Cesar Rodriguez, Gaymon Bennett, Jay D Keasling, [[Drew Endy]],Adam P Arkin<br>
-	[http://www.nature.com ~~URL pending] [http:~~//~~www~~.~~nature~~.~~com/\| PDF reprint pending~~]	+	[http://www.nature.com/nmeth/journal/v10/n4/full/nmeth.2403.html URL]<br>

	'''Design and analysis of genetically encoded counters'''<br>		'''Design and analysis of genetically encoded counters'''<br>

Endy at 22:24, 13 May 2013

Endy — Mon, 13 May 2013 22:24:27 GMT

←Older revision		Revision as of 22:24, 13 May 2013
Line 61:		Line 61:

	'''Amplifying genetic logic gates'''<br>		'''Amplifying genetic logic gates'''<br>
-	''Science,'' 28 March 2013<br>	+	''Science,'' 28 March 2013, doi: 10.1126/science.1232758 <br>
	Jerome Bonnet, Peter Yin, Monica E. Ortiz, Pakpoom Subsoontorn, [[Drew Endy]]<br>		Jerome Bonnet, Peter Yin, Monica E. Ortiz, Pakpoom Subsoontorn, [[Drew Endy]]<br>
	[http://www.sciencemag.org/content/340/6132/599 URL] [[Media: \| PDF reprint]]<br>		[http://www.sciencemag.org/content/340/6132/599 URL] [[Media: \| PDF reprint]]<br>
Line 67:		Line 67:

	'''Measurement and modeling of intrinsic transcription terminators'''<br>		'''Measurement and modeling of intrinsic transcription terminators'''<br>
-	''Nucleic Acids Research,'' ~~in press~~<br>	+	''Nucleic Acids Research,'' March 19, 2013, doi: 10.1093/nar/gkt163<br>
	Guillaume Cambray, Joao C. Guimaraes, Vivek K. Mutalik, Colin Lam1, Quynh-Anh Mai, Tim Thimmaiah, James M. Carothers, Adam P. Arkin, [[Drew Endy]]<br>		Guillaume Cambray, Joao C. Guimaraes, Vivek K. Mutalik, Colin Lam1, Quynh-Anh Mai, Tim Thimmaiah, James M. Carothers, Adam P. Arkin, [[Drew Endy]]<br>
	[http://nar.oxfordjournals.org/content/41/9/5139.long URL]		[http://nar.oxfordjournals.org/content/41/9/5139.long URL]

Endy at 22:23, 13 May 2013

Endy — Mon, 13 May 2013 22:23:14 GMT

←Older revision		Revision as of 22:23, 13 May 2013
Line 49:		Line 49:

	===Peer Reviewed Research Articles===		===Peer Reviewed Research Articles===
		+
	'''One-step cloning and chromosomal integration of DNA'''<br>		'''One-step cloning and chromosomal integration of DNA'''<br>
	''ACS Synthetic Biology,'' in press<br>		''ACS Synthetic Biology,'' in press<br>
Line 67:		Line 68:
	'''Measurement and modeling of intrinsic transcription terminators'''<br>		'''Measurement and modeling of intrinsic transcription terminators'''<br>
	''Nucleic Acids Research,'' in press<br>		''Nucleic Acids Research,'' in press<br>
-	Guillaume Cambray ~~et al~~.<br>	+	Guillaume Cambray, Joao C. Guimaraes, Vivek K. Mutalik, Colin Lam1, Quynh-Anh Mai, Tim Thimmaiah, James M. Carothers, Adam P. Arkin, [[Drew Endy]]<br>
-	[http://~~www.~~nar.org ~~URL pending] [http:~~//~~www.nar.org~~/~~\| PDF reprint pending~~]	+	[http://nar.oxfordjournals.org/content/41/9/5139.long URL]

	'''Precise and reliable gene expression via standard transcription and translation initiation elements'''<br>		'''Precise and reliable gene expression via standard transcription and translation initiation elements'''<br>

Endy: /* Peer Reviewed Research Articles */

Endy — Mon, 13 May 2013 22:20:15 GMT

Peer Reviewed Research Articles

←Older revision		Revision as of 22:20, 13 May 2013
Line 61:		Line 61:
	'''Amplifying genetic logic gates'''<br>		'''Amplifying genetic logic gates'''<br>
	''Science,'' 28 March 2013<br>		''Science,'' 28 March 2013<br>
-	Jerome Bonnet ~~et al~~.<br>	+	Jerome Bonnet, Peter Yin, Monica E. Ortiz, Pakpoom Subsoontorn, [[Drew Endy]]<br>
		+	[http://www.sciencemag.org/content/340/6132/599 URL] [[Media: \| PDF reprint]]<br>
		+	[http://www.npr.org/2013/03/29/175604770/tiny-dna-switches-aim-to-revolutionize-cellular-computing NPR] [http://youtu.be/ahYZBeP_r5U YouTube primer]

	'''Measurement and modeling of intrinsic transcription terminators'''<br>		'''Measurement and modeling of intrinsic transcription terminators'''<br>