Ellis:Publications

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'''Click the links to read our papers'''                                     
'''Click the links to read our papers'''                                     
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<font face="trebuchet ms" style="color:#000000">We're in the lab right now working on new publications.  '''Latest Update: MAR 2012'''
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<font face="trebuchet ms" style="color:#000000">We're in the lab right now working on new publications.  '''Latest Update: JULY 2013'''
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! || Title !! Authors !! Published !! PDF !! Screenshot  
! || Title !! Authors !! Published !! PDF !! Screenshot  
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! Synthetic Biology Research
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! Synthetic Biology by Ellis Lab
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| Engineering of regulated stochastic cell fate determination
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| '''Wu W, Su RQ, Ellis T, Lai YC, Wang X'''
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| '''PNAS USA''', June 2013 [http://www.pnas.org/content/110/26/10610.abstract DOI Link]
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| [http://openwetware.org/images/2/23/PNAS-2013-Wu-10610-5.pdf View PDF]
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| [[Image:Stochastic.png|160px|right|PNAS USA]]
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| Building-in Biosafety for Synthetic Biology
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| '''Wright O, Stan GB, Ellis T'''
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| '''Microbiology''', March 2013 [http://mic.sgmjournals.org/content/early/2013/03/20/mic.0.066308-0.full.pdf+html DOI Link]
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| [http://openwetware.org/images/e/e9/OlliePaper.pdf View PDF]
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| [[Image:Biosecurity.png|160px|right|Microbiology]]
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| Rational Diversification of a Promoter Providing Fine-Tuned Expression and Orthogonal Regulation for Synthetic Biology
| Rational Diversification of a Promoter Providing Fine-Tuned Expression and Orthogonal Regulation for Synthetic Biology
| '''Blount BA, Weenink T, Vasylechko S, Ellis T'''
| '''Blount BA, Weenink T, Vasylechko S, Ellis T'''
| '''PLoS One''', March 2012 [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0033279 DOI Link]
| '''PLoS One''', March 2012 [http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0033279 DOI Link]
| [http://openwetware.org/images/b/b7/TALORsPDF.pdf View PDF]
| [http://openwetware.org/images/b/b7/TALORsPDF.pdf View PDF]
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| [[Image:TALORs.jpg|160px|right|PLos One]]
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| [[Image:TALORs.jpg|160px|right|PLoS One]]
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! Synthetic Biology Reviews
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| Construction of synthetic regulatory networks in yeast
| Construction of synthetic regulatory networks in yeast
| '''Blount BA, Weenink T, Ellis T'''
| '''Blount BA, Weenink T, Ellis T'''

Revision as of 08:35, 1 July 2013

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Click the links to read our papers

We're in the lab right now working on new publications. Latest Update: JULY 2013

Title Authors Published PDF Screenshot
Synthetic Biology by Ellis Lab Engineering of regulated stochastic cell fate determination Wu W, Su RQ, Ellis T, Lai YC, Wang X PNAS USA, June 2013 DOI Link View PDF
PNAS USA
Building-in Biosafety for Synthetic Biology Wright O, Stan GB, Ellis T Microbiology, March 2013 DOI Link View PDF
Microbiology
Rational Diversification of a Promoter Providing Fine-Tuned Expression and Orthogonal Regulation for Synthetic Biology Blount BA, Weenink T, Vasylechko S, Ellis T PLoS One, March 2012 DOI Link View PDF
PLoS One
Construction of synthetic regulatory networks in yeast Blount BA, Weenink T, Ellis T FEBS Letters, Feb 2012 DOI Link View PDF
FEBS Letters
DNA assembly for synthetic biology: from parts to pathways and beyond Ellis T, Adie T, Baldwin GS Integrative Biology, Feb 2011, Vol 3, Page 109 DOI Link View PDF
Integrative Biology
Synthetic Biology by Tom Ellis Diversity-based, model-guided construction of synthetic gene networks with predicted functions Ellis T, Wang X, Collins JJ Nature Biotechnology, April 2009, Vol 27, Page 465 DOI Link View PDF
Nature Biotech
Gene regulation: hacking the network on a sugar high Ellis T, Wang X, Collins JJ Molecular Cell, 2008, Vol 30, Page 1 DOI Link View PDF
Mol Cell
Synthesis and screening of regulatory component libraries for synthetic biology Ellis T Nature Protocols, April 2009 DOI Link View PDF
Nature Protocols
Previous Publications by Tom Ellis Novel C8-linked pyrrolobenzodiazepine (PBD)-heterocycle conjugates that recognize DNA sequences containing an inverted CCAAT box Brucoli F, Hawkins RM, James CH, Wells G, Jenkins TC, Ellis T, Hartley JA, Howard PW, Thurston DE Bioorg Med Chem Letters, 2011, Vol 21, Page 3780 [1] View PDF
Bioorg Med Chem Lett
Molecular recognition of DNA by rigid [N]-polynorbornane derived bifunctional intercalators: synthesis and evaluation of their binding properties Van Vliet LD, Ellis T, Foley PJ, Liu L, Pfeffer FM, Russell RA, Warrener RN, Hollfelder F, Waring MJ Journal of Medicinal Chemistry, 2007, Vol 50, Page 2326 DOI Link View PDF
J Med Chem
A 96-well DNase I footprinting screen for drug-DNA interactions Ellis T, Evans DA, Martin CR, Hartley JA Nucleic Acids Research, 2007, Vol 35 DOI Link View PDF
NAR
Sequence-selective interaction of the minor-groove interstrand cross-linking agent SJG-136 with naked and cellular DNA: footprinting and enzyme inhibition studies Martin C, Ellis T, McGurk CJ, Jenkins TC, Hartley JA, Waring MJ, Thurston DE Biochemistry, 2005, Vol 44, Page 4135 DOI Link View PDF
Biochemistry
DNase I footprinting of small molecule binding sites on DNA Bailly C, Kluza J, Martin C, Ellis T, Waring MJ Methods in Molecular Biology, 2005, Vol 288, Page 319 DOI Link Book Chapter
Meth Mol Biol
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