Dahlquist:GRNmap: Difference between revisions
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#*#The window that pops open is an Editor. The code can be altered in this window, and | #*#The window that pops open is an Editor. The code can be altered in this window, and | ||
#*#For the next step to work, the specific folder that holds the MATLAB file must be selected. | #*#For the next step to work, the specific folder that holds the MATLAB file must be selected. | ||
#In the Editor window, find the green play button beneath the Main toolbar. When you hit this, another window will pop up. | #In the Editor window, find the green play button beneath the Main toolbar. When you hit this, another window will pop up. [[Image:Run.png|thumb|right|150px|The Run button]] | ||
#Select the file you wish to use as the input into your chosen MATLAB code and press open. | #Select the file you wish to use as the input into your chosen MATLAB code and press open. | ||
##Depending on the year of your MATLAB software, the toolbar that signifies the program is processing your data may not be obviously available. | ##Depending on the year of your MATLAB software, the toolbar that signifies the program is processing your data may not be obviously available. | ||
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=== The Results === | === The Results === | ||
#Depending on what the input is, a figure will pop up and show the progress being made. | #Depending on what the input is, a figure will pop up and show the progress being made. [[Image:ProgressBar.png|thumb|upright=1.5|alt=Progress of data output in MATLAB|The progress window that may show up on the screen.]] | ||
#* Again, the year of the MATLAB software may affect how quickly the output is produced. | #* Again, the year of the MATLAB software may affect how quickly the output is produced. | ||
#After the information has been completed, a window(s) will pop up with figures of the data that was inserted with their graphical interpretations. | #After the information has been completed, a window(s) will pop up with figures of the data that was inserted with their graphical interpretations. | ||
Revision as of 16:10, 25 September 2014
Protocol for Running GRNmap through MATLAB
Start Up
- Make sure that you have a registered, working MATLAB program and then open it.
- Go to the File in the upper left hand corner of the program - or - you could hit the open folder below the Main toolbar.
The two options that will open a folder - Choose the Folder that holds the information that you want to have MATLAB utilize.
Using MATLAB
- Once the folder that is chosen, select the MATLAB file that holds the code for what will be run.
- After the MATLAB file has been selected a window will pop up
- Please note two things:
- The window that pops open is an Editor. The code can be altered in this window, and
- For the next step to work, the specific folder that holds the MATLAB file must be selected.
- Please note two things:
- In the Editor window, find the green play button beneath the Main toolbar. When you hit this, another window will pop up.
The Run button - Select the file you wish to use as the input into your chosen MATLAB code and press open.
- Depending on the year of your MATLAB software, the toolbar that signifies the program is processing your data may not be obviously available.
The Results
- Depending on what the input is, a figure will pop up and show the progress being made.
The progress window that may show up on the screen. - Again, the year of the MATLAB software may affect how quickly the output is produced.
- After the information has been completed, a window(s) will pop up with figures of the data that was inserted with their graphical interpretations.
- An Excel file will be saved that has the extrapolated data from the input with the output.
- Both this file and the figures/images are saved in the folder that the MATLAB and the input files were chosen from.
Links
- Back to Dahlquist on OpenWebWare or go to her home page Dahlquist Lab
- Back to User:Natalie Williams
