Dahlquist:BOSC ISMB 2016 Notes: Difference between revisions
From OpenWetWare
Jump to navigationJump to search
(→BOSC SIG Day 2 2016-07-09: added MetaR and genepattern notebooks) |
(→BOSC SIG Day 2 2016-07-09: add ReportMD) |
||
| Line 13: | Line 13: | ||
** an integrative analytical environment for genomic research; can do RNAseq analysis | ** an integrative analytical environment for genomic research; can do RNAseq analysis | ||
** available on Indiana University supercomputer cluster | ** available on Indiana University supercomputer cluster | ||
* [https://github.com/humburg/reportmd ReportMD] | |||
** uses R markdown to generate linked HTML reports | |||
Revision as of 11:15, 9 July 2016
BOSC/NetBio SIG Day 1 2016-07-08
BOSC SIG Day 2 2016-07-09
- MetaR from Fabien Campagne lab
- potentially collaborate on a grant; broader impacts of teaching MetaR to undergrads
- GenePattern Notebooks
- an integrative analytical environment for genomic research; can do RNAseq analysis
- available on Indiana University supercomputer cluster
- ReportMD
- uses R markdown to generate linked HTML reports
