DNAmazingResult: Difference between revisions

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[[Image:Resultsum.png|500px|right]]
[[Image:Resultsum.png|500px|right]]
Basically, during the summer we have successfully developed the following features for the first version of DNAmazing:
Basically, during the summer we have successfully developed the following features for the first version of DNAmazing:





Revision as of 19:58, 2 November 2011

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<div class="extra"> <div id="page_1"> <div class="main" style="padding-top:10px; padding-bottom:10px"> <!--header --> <header> <a href="index.html" id="logo">DNAmazing asfsaf. Smart. Effective</a> <nav> <ul id="menu"> <li class="nav1"><a href="http://openwetware.org/wiki/User:NUS_Dnamazing">Home</a></li> <li class="nav2"><a href="http://openwetware.org/wiki/DNAmazingMission">Mission</a></li> <li class="nav3"><a href="http://openwetware.org/wiki/DNAmazingProcess">Process</a></li> <li class="nav4"><a href="http://openwetware.org/wiki/DNAmazingResult">Results</a></li> <li class="nav5"><a href="http://openwetware.org/wiki/DNAmazingResources">Resources</a></li> </ul> </nav> </header> <!--header end-->


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Overview

Basically, during the summer we have successfully developed the following features for the first version of DNAmazing:





1."One-click" feature to get the results(Automatic generation of folding path, crossover positions, and staple sequence)


Thermal stability calculation of sticky ends


Bonus: Basic user-friendly interface


"One-click" feature to get the results

The DNAmazing program successfully

  • Perform the automatic generation of possible scaffold folding paths from users' input and crossover positions for 2D DNA Origami structures
  • Generate possible sticky end sequences
  • Generate staple sequences with sticky ends which are necessary to conduct wet lab experiments for 2D DNA Origami structures.

With the "one-click" feature, the processing of DNA Origami design can be accelerated as users no longer have to do the raster filling (the folding path) manually which is definitely tedious for large and complex structure.

Automatic generation of possible folding paths and crossover positions

Generation of possible sticky end sequences

Generation of staple sequences