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=General=
==General==
#[[Protocols|In silicio protocols]]
*[[Computing/Conferencing|Conferencing]] (phone, video, IM/chat)
#[[Gnome]]
*[[Computing/Cluster|Cluster]]
#[[Visualization#Graphing data | Graphing high dimensional data]]
*[[Computing/Eclipse|Eclipse]]
#[[MATLAB]]
*[[Computing/Emacs|Emacs]]
#[[Modeller]]
*[[Computing/Encryption|Encryption]]
#[[PPT to PDF on a Mac]]
*[[Computing/Firefox|Firefox]]
#[[Process Control]]
*[[Computing/Java|Java]]
#[[Software for papers, posters and talks]]
*[[Computing/Linux|Linux]] - various resources
#[[VectorNTI]]
*[[Computing/MySQL|MySQL]]
#[[Perl]]
*[[Perl]]
#[[Ruby]]
*[[Computing/PHP|PHP]]
*[[PPT to PDF on a Mac]]
*[[Computing/Python|Python]]
*[[Ruby]]
*[[Computing/SSH|SSH]] - Secure Shell
*[[Computing/SSL|SSL]] - Secure Socket Layer
*[[Computing/Subversion|Subversion]] (SVN) version control system
*[[Computing/Virtualization|Virtualization]]
*[[Computing/VNC|VNC]]
*[[Computing/VoIP|VoIP]]
*[[Computing/Web|Web programming]]


=MIT=
----
#[[Computing/Athena|Athena]] - AFS lockers, Kerberos tickets, user accounts
*[http://www.regular-expressions.info/ Regular Expressions] - tutorial and examples in various languages (a.k.a. [http://regexp.info/ regexp.info])
#[[Computing/BioMicro Center|BioMicro Center]] - DNA-NET accounts and file storage
*[http://www.ilovejackdaniels.com/ ILoveJackDaniel's] - web design and development reference
#[[Computing/BioMicro Cluster|BioMicro Cluster]]
*[http://techcheatsheets.com/ TechCheatSheets.com] - technology and programming quick reference
*[http://www.google.com/codesearch/advanced_code_search Google Code Search] helps you find function definitions and sample code by giving you one place to search publicly accessible source code hosted on the Internet
*[http://gotapi.com/ gotAPI.com] - the most comprehensive API collection on the web
**[http://start.gotapi.com/ start.gotapi.com] - alternative search interface
*[http://www.publicidadedigital.com/ Publicidade Digital] - Technology on Digital Marketing, News and Public Articles reference.
*[http://www.otimizacaodesites.org/ Otimização de Sites] - Technology CSS and PHP SEO programming reference
*[http://www.otimizacaodewebsites.net/ Otimização de Sites] - CSS and PHP for SEO services and programming
*[http://www.marketingdigital.net.br/ Marketing Digital] - Marketing Digital Reference
 
==Scientific==
*[http://www.genomecompiler.com/?utm_source=refferal_website&utm_medium=referral&utm_term=computing&utm_content=website&utm_campaign=openwetware Genome Compiler] - a free all-in-one DNA design software
*[[Computing/Robotics|Robotics software (Liquid Handling, etc)]]
*[[Protocols|''In silico'' protocols]] on OWW
*[http://www.elabprotocols.com/search/ Dynamic protocols] - Find, create and share dynamic protocols that adjust to your environment and specifications at eLabProtocols for free
*[[Computational_Tools|Computational Tools]] for synthetic biology on OWW
*[http://www.swc.scipy.org/ Software Carpentry] - this course is an intensive introduction to basic software development practices for scientists and engineers that can reduce the time they spend programming by 20-25%.
*[[Visualization#Graphing data | Graphing high dimensional data]]
*[[Biosoftware_for_Mac|Biosoftware for Mac]]
*[[Software for papers, posters and talks]]
*[[VectorNTI]]
*[[MATLAB]]
**[[MATLAB_Computational_Biology_Tools]]
*[[R_Statistics|R for Statistical Computing]]
*[http://helios.bto.ed.ac.uk/bto/statistics/tress1.html The Really Easy Statistics Site]
*[[Modeller]]
*[[Microfootprinter]]
*[http://genamics.com/software Genamics SoftwareSeek] links to biotechnology software
*[[Computing/LIMS|LIMS]] - Laboratory Information Management Systems
*[http://pixie.princeton.edu/pixie/documents.php bioPIXIE] is a novel system for biological data integration and visualization that allows the user to discover interaction networks and pathways in which the user's gene(s)of interest participate
*[http://perlprimer.sourceforge.net/ PerlPrimer] - open-source PCR primer design (Windows and Linux)
*[http://mekentosj.com/enzymex/ EnzymeX] is a program for molecular biologists, developed to help you determine which restriction enzymes you should use to cut your DNA of interest
*[http://mekentosj.com/papers/ Papers] allows find, download, archive, and organize all your articles within a single application
*[http://mekentosj.com/4peaks/ 4Peaks] is a program that helps molecular biologists to visualize and edit their DNA sequence files
*[http://mekentosj.com/labassistant/ LabAssistant] is a scientific program developed to help you organize your experiments instead of using multiple timers, stickies, and a labjournal that you have to organize all manually
*[http://mekentosj.com/irnai/ iRNAi] is a tool to help scientists quickly design error free oligos
*[http://research.med.helsinki.fi/plasmadna/ PlasmaDNA] is a freeware program designed to analyse and manipulate DNA sequences to simulate restriction enzyme digestions, ligations and PCR.  Identical versions are available for PC and Mac operating systems.
*The [http://tranche.proteomecommons.org/ Tranche Project] is a free and open source file sharing tool that enables collections of computers to easily share and cite scientific data sets.
 
==Software development==
*[http://cyberunits.sourceforge.net CyberUnits], a library of reusable Pascal units for high-performance computer simulations in life sciences.
*[http://wiki.lazarus.freepascal.org/Portal:SciTech Lazarus/FPC SciTech Portal], Lazarus and Free Pascal for Science, medicine and technology.
*[http://puma-repository.sourceforge.net/ PUMA Repository], Pascal Units for Medical Applications
 
==MIT==
*[[Computing/Athena|Athena]] - AFS lockers, Kerberos tickets, user accounts
*[[Computing/BioMicro Center|BioMicro Center]] - DNA-NET accounts and file storage
*[[Computing/BioMicro Cluster|BioMicro Cluster]]
*[http://deltag5.lns.mit.edu/xgrid/ Xgrid@MIT] - join the grid and donate or borrow CPU cycles
*[http://www.macresearch.org/openmacgrid OpenMacGrid] by MacResearch is a computing grid built up entirely of Macs using Apple's Xgrid technology
*[http://libraries.mit.edu/guides/cheatsheets/chemdraw/index.html ChemDraw Ultra]
**BioDraw tools for drawing, sharing, and presenting biological pathways are included with ChemDraw. Common pathway elements (membranes, DNA, enzymes, receptors, reaction arrows, etc.) are built in and other elements may be imported.
*[http://web.mit.edu/ist/topics/email/query.html Find Out the Name of Your Post Office Server]
*[http://web.mit.edu/is/help/nospam Spam screening help page]
*[https://nic.mit.edu/cgi-bin/spamscreen Spam Screening Personalized Settings]
*[http://tig.csail.mit.edu/ the infrastructure group @ csail] - useful MIT computing info though a lot of it is specific CSAIL
*[http://web.mit.edu/network/ MIT Network and Infrastructure Team] - network maps, etc
*[http://web.mit.edu/itpartners/ MIT IT Partners]
 
==General Non Scientific Programming==
*[http://www.planodeestudante.com.br/ Plano de Estudante]
*[http://www.vazamento.net.br/ Vazamento]
*[http://www.otimizacaodesites.org/blog/ Blog]
*[http://www.telas-de-protecao.com/ Telas de Proteção]
*[http://www.apartamentonapraia.net.br/ Apartamento na Praia]
*[http://www.artigos.net.br/ Artigos]
*[http://www.monografia.net.br/ Monografia]
*[http://www.sorveteria.net/ Sorveteria]
*[http://www.plano-de-saude.com/ Plano de Saúde]
*[http://www.convenio-medico.com/ Convênio Médico]
*[http://www.ddleak.com.br/ Desentupidora]
*[http://www.casas.net.br/ Casas]
*[http://www.apartamentos.net.br/ Apartamentos]
*[http://www.papeldeparedeparadecoracao.com/ Papel de Parede]
*[http://www.lingeriefashion.com.br/ Lingerie]
*[http://www.brindes-personalizados.net/ Brindes Personalizados]
*[http://www.alluringstone.com/ Granitte]
*[http://www.brechomarialouca.com.br/ Brechó]
*[http://www.casasnapraia.net.br/ Casas na Praia]
*[http://www.concertinas.biz/ Concertinas]
*[http://www.concertinas.net.br/ Concertinas]
*[http://www.empresasavenda.org/ Empresas a Venda]
*[http://www.estilodevida.net.br/ Estilo de Vida]
*[http://www.floricultura.biz/ Floricultura]
*[http://www.seo-brasil.net/ SEO]
*[http://www.voiptec.com.br? Voip]
*[http://www.portao.net.br/ Portão]

Latest revision as of 05:17, 9 December 2015

General

Scientific

Software development

MIT

General Non Scientific Programming

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