ChemEng575Docs

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__NOTOC__
__NOTOC__
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== This week! (Week 4) ==
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== Schedule for Semester ==
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'''Reading'''<br>
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Updated 1-26-15<br>
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Tissue Engineering Chapters 3 & 6<br>
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[[Image:575_Schedule_2015.jpg | 750px]]<br>
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'''CELL ADHESION'''<br>
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== Lecture Slides ==
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External Reading: Self-assembled monolayers [http://www.ncbi.nlm.nih.gov/pubmed/15005605 pubmed link]<br>
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[[Media:575_Lecture_1.pptx |Lecture 1 Slides]]<br>
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External Reading: adhesion and stem cell differentiation [http://www.ncbi.nlm.nih.gov/pubmed/15068789 pubmed link]<br>
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[[Media:575_Lecture_2.pptx |Lecture 2 Slides]]<br>
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External Reading: cell size and death [http://www.ncbi.nlm.nih.gov/pubmed/8171320 pubmed link]<br>
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[[Media:575_Lecture_3.pptx |Lecture 3 Slides]]<br>
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[[Media:575_Lecture_4.pptx |Lecture 4 Slides]]<br>
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[[Media:575_Lecture_5.pptx |Lecture 5 Slides]]<br>
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[[Media:575_Lecture_6.pptx |Lecture 6 Slides]]<br>
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[[Media:575_Lecture_7.pptx |Lecture 7 Slides]]<br>
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[[Media:575_Lecture_8.pptx |Lecture 8 Slides]]<br>
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[[Media:590B_Lecture_6.pptx | Lecture 6 Slides]]<br>
 
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== Week 3 ==
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== Readings ==
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'''Reading'''<br>
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'''Lecture 1''' 1/20/15<br>
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Tissue Engineering Chapters 3 & 6<br>
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None
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'''ESCs'''<br>
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'''Lecture 2''' 1/22/15<br>
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External Reading: ESCs from blastocysts [http://www.ncbi.nlm.nih.gov/pubmed/14999088 pubmed link]<br>
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None<br>
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External Reading: ESCs from blastocysts, 2 [http://www.ncbi.nlm.nih.gov/pubmed/9804556 pubmed link]<br>
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Need help with biology?  Check out MBOC (Alberts) from the library, Great resource.<br>
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External Reading: Geron's ESC-to-oligodendrocyte [http://www.ncbi.nlm.nih.gov/pubmed/15888645 pubmed link]<br>
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'''iPSCs'''<br>
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'''Lecture 3''' 1/29/15<br>
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External Reading: Seminal iPSC paper [http://www.ncbi.nlm.nih.gov/pubmed/16904174 pubmed link]<br>
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Chapter 2 of the wiki book [[575 Wikis]]
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[[Media:590B_Lecture_5.pptx | Lecture 5 Slides]]<br>
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'''Lecture 4''' 2/3/15<br>
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Paper Review [[Media:Langer1993.pdf | 1993 Intro to Tissue Engineering]]<br>
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== Week 2 ==
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'''Lecture 5''' 2/10/15<br>
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'''Reading'''<br>
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Paper Review [[Media:iPSC_Breakthrough.pdf | The iPSC Breakthrough Paper]]<br>
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'''STEM CELLS'''<br>
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External Reading: Comprehensive stem cell review [http://www.ncbi.nlm.nih.gov/pubmed/10647940 pubmed link]<br>
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'''HSCs'''<br>
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'''Lecture 6''' 2/12/15<br>
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External Reading: HSC to hepatocyte differentiation [http://www.ncbi.nlm.nih.gov/pubmed/11062533 pubmed link]<br>
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Chapter 3 of the wiki book [[575 Wikis]]
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External Reading: Transplanting HSCs [http://www.ncbi.nlm.nih.gov/pubmed/16641398 pubmed link]<br>
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'''MSCs'''<br>
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'''Lecture 7''' 2/19/15<br>
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External Reading: MSC differentiation potential [http://www.ncbi.nlm.nih.gov/pubmed/10102814 pubmed link]<br>
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Chapter 4 of the wiki book [[575 Wikis]]
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External Reading: Engler, MSCs and stiffness [http://www.ncbi.nlm.nih.gov/pubmed/16923388 pubmed link]<br>
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'''Lecture Slides'''<br>
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'''Lecture 8''' 2/24/15<br>
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[[Media:590B_Lecture_3.pdf | Lecture 3 Slides]]<br>
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Paper Review [[Media:McBeath_CellShape.pdf | Cell Shape and Stem Cells]]<br>
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[[Media:590B_Lecture_4.pptx | Lecture 4 Slides]]<br>
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== Week 1 ==
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'''Lecture 9'''<br>
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'''Reading'''<br>
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Chapter 4 of the wiki book [[575 Wikis]]
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Tissue Engineering Chapters 1-4<br>
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External Reading: Sharp/Langer, Promoting Convergence [http://www.ncbi.nlm.nih.gov/pubmed?term=sharp%20langer%20promoting%20convergence pubmed link]<br>
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External Reading: Huebsch and Mooney, Biomaterials [http://www.ncbi.nlm.nih.gov/pubmed/19940912 pubmed link]<br>
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'''Lecture Slides'''<br>
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'''Lecture 10'''<br>
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[[Media:590B_Lecture_1.pptx |Lecture 1 Slides]]<br>
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TBD
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[[Media:590B_Lecture_2.pptx |Lecture 2 Slides]]<br>
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== Week 5 ==
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'''Lecture 11'''<br>
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'''Reading'''<br>
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TBD
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NIH grant guidelines page [http://grants.nih.gov/grants/funding/424/index.htm NIH link]<br>
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'''grants for review day'''<br>
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'''Lecture 12'''<br>
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[[Media:590B_Grant_1_for_review.docx | Group 1 Grant Review]]<br>
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TBD
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[[Media:590B_Grant_2_for_review.docx | Group 2 Grant Review]]<br>
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[[Media:590B_Grant_3_for_review.docx | Group 3 Grant Review]]<br>
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[[Media:590B_specific_aims_sample.docx | Sample Specific Aims Page]]<br>
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'''Lecture Slides'''
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'''Lecture 13'''<br>
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[[Media:590B_Lecture_8.pptx | Lecture 8 Slides]]<br>
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TBD
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== Week 6 ==
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'''Lecture 14'''<br>
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'''Reading'''<br>
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TBD
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Tissue Engineering Chapter 12<br>
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'''Lecture Slides'''<br>
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'''Lecture 15'''<br>
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[[Media:590B_Lecture_7.pptx | Lecture 7 Slides]]<br>
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TBD
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'''Lecture 16'''<br>
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TBD
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''everything below is old from 2012, don't use yet''
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'''Lecture 17'''<br>
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***
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TBD
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== Week 8 ==
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'''Lecture 18'''<br>
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Lecture 12, 3/13: <br>
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TBD
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Collective cell migration review [http://pubs.rsc.org/en/content/articlelanding/2010/ib/c0ib00052c IBiol link]<br>
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Individual vs collective migration [http://jcb.rupress.org/content/188/1/11.full JCB link]<br>
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== Week 7 ==
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'''Lecture 19'''<br>
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Lecture 11, 3/8: <br>
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TBD
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See your lecture slides!
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== Week 6 ==
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'''Lecture 20'''<br>
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Lecture 8, 2/28: <br>
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TBD
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Patterned RGDs [http://onlinelibrary.wiley.com/doi/10.1002/anie.201002699/abstract Wiley link]<br>
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Engineered surfaces review [http://www.ncbi.nlm.nih.gov/pubmed/19864174 pubmed link]<br>
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biphasic migration [http://www.ncbi.nlm.nih.gov/pubmed/8335696 pubmed link]<br>
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microfluidics [http://www.ncbi.nlm.nih.gov/pubmed/15986641 pubmed link]<br>
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Lecture 9, 3/1: <br>
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first stiffness/migration paper [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1300921/ pubmed link]<br>
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gradients and stiffness [http://pubs.acs.org/doi/abs/10.1021/la026403p ACS link]<br>
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biphasic migration and stiffness [http://www.ncbi.nlm.nih.gov/pubmed/15669099 pubmed link]<br>
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3D stiffness in collagen [http://www.ncbi.nlm.nih.gov/pubmed/18621811 pubmed link]<br>
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3D scaffold stiffness [http://www.ncbi.nlm.nih.gov/pubmed/21191996 pubmed link]<br>
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3D matrigel stiffness [http://www.pnas.org/content/103/29/10889 PNAS link]<br>
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== Week 5 ==
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External Reading: Patterning of growth factors [http://www.ncbi.nlm.nih.gov/pubmed/18850272 pubmed link]<br>
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External Reading: Modeling Interstitial flow [http://www.ncbi.nlm.nih.gov/pubmed/16603487 pubmed link]<br>
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External Reading: Chemotaxis assays review [http://www.ncbi.nlm.nih.gov/pubmed/20023801 pubmed link]<br>
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External Reading: Chemotaxis and directed migration [http://www.ncbi.nlm.nih.gov/pubmed/19603038 pubmed link]<br>
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Current revision

      Home                 Documents               Assignments               Wiki Schedule                 Wiki Pages                 Course Syllabus


Schedule for Semester

Updated 1-26-15

Lecture Slides

Lecture 1 Slides
Lecture 2 Slides
Lecture 3 Slides
Lecture 4 Slides
Lecture 5 Slides
Lecture 6 Slides
Lecture 7 Slides
Lecture 8 Slides


Readings

Lecture 1 1/20/15
None

Lecture 2 1/22/15
None
Need help with biology? Check out MBOC (Alberts) from the library, Great resource.

Lecture 3 1/29/15
Chapter 2 of the wiki book 575 Wikis

Lecture 4 2/3/15
Paper Review 1993 Intro to Tissue Engineering

Lecture 5 2/10/15
Paper Review The iPSC Breakthrough Paper

Lecture 6 2/12/15
Chapter 3 of the wiki book 575 Wikis

Lecture 7 2/19/15
Chapter 4 of the wiki book 575 Wikis

Lecture 8 2/24/15
Paper Review Cell Shape and Stem Cells

Lecture 9
Chapter 4 of the wiki book 575 Wikis

Lecture 10
TBD

Lecture 11
TBD

Lecture 12
TBD

Lecture 13
TBD

Lecture 14
TBD

Lecture 15
TBD

Lecture 16
TBD

Lecture 17
TBD

Lecture 18
TBD

Lecture 19
TBD

Lecture 20

TBD
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