CHIP:Data: Difference between revisions

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===='''Small RNA target prediction program (zip archive):''' [http://openwetware.org/wiki/Image:RankFusion_V1.zip]====
===='''Small RNA target prediction program (zip archive):''' [http://openwetware.org/wiki/Image:RankFusion_V1.zip]====
:'''This is supporting information for an upcoming paper by Diogo F. T. Veiga.'''
:'''This is supporting information for an upcoming paper by Diogo F. T. Veiga.'''
 
:'''Additional Supplemental Materials are available from here: ''' [http://openwetware.org/wiki/Image:Supplemental_Material.zip]


'''Back to the main page:''' [[CHIP]]
'''Back to the main page:''' [[CHIP]]

Revision as of 12:07, 14 July 2014

Supporting data and software

Fitness landscape data (rar archive): [1]

This is supporting information for the paper:
Nevozhay D, Adams RM, Van Itallie E, Bennett MR, Balázsi G,
Mapping the environmental fitness landscape of a synthetic gene circuit.
PLoS Comput. Biol. 8(4):e1002480 (2012).
PMID: 22511863, link to the PDF: [2]


Plasmids with sequences ready to be ordered from the public repository AddGene: [3]

These plasmids are supporting information for the following papers:
Nevozhay D, Zal T, Balázsi G,
Transferring a synthetic gene circuit from yeast to mammalian cells.
Nat Commun. 2013;4:1451.
PMID: 23385595, link to the PDF: coming soon

Nevozhay D, Adams RM, Van Itallie E, Bennett MR, Balázsi G,
Mapping the environmental fitness landscape of a synthetic gene circuit.
PLoS Comput. Biol. 8(4):e1002480 (2012).
PMID: 22511863, link to the PDF: [4]

Nevozhay D, Adams RM, Murphy KF, Josić K, Balázsi G,
Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression.
Proc. Natl. Acad. Sci. U.S.A. 2009 Mar 31;106(13):5123-8.
PMID: 19279212, link to the PDF: [5]

Small RNA target prediction program (zip archive): [6]

This is supporting information for an upcoming paper by Diogo F. T. Veiga.
Additional Supplemental Materials are available from here: [7]

Back to the main page: CHIP