Biomolecular Breadboards:Models

From OpenWetWare

(Difference between revisions)
Jump to: navigation, search
(Cell Free Expression Models)
(GamS modeling)
Line 10: Line 10:
For linear DNA, GamS can be used to reduce the rate of degradation of DNA and increase the expression level (see [[Biomolecular Breadboards:Preliminary Data|preliminary data]] for more information).  The figure below shows the results of a preliminary model that we are developing to capture the affects of gamS.
For linear DNA, GamS can be used to reduce the rate of degradation of DNA and increase the expression level (see [[Biomolecular Breadboards:Preliminary Data|preliminary data]] for more information).  The figure below shows the results of a preliminary model that we are developing to capture the affects of gamS.
 +
 +
{|
 +
|-
 +
|
[[Image:gamS-protsynt81bis_05Sep12.png|400px]]
[[Image:gamS-protsynt81bis_05Sep12.png|400px]]
 +
| valign=top |
 +
* Model files: [http://sourceforge.net/p/txtl/code/7/tree/trunk/models/txtl/protsynt81bis.m protsynt81bis.m], [http://sourceforge.net/p/txtl/code/7/tree/trunk/models/txtl/gamS_plot.m gamS_plot.m]
 +
<hr>
 +
|}
 +
'''Figure 1. protein expression as a function of gamS concentration'''

Revision as of 15:00, 5 September 2012

Home Protocols DNA parts Preliminary Data Models More Info

This page contains information about models for simulation and analysis of biomolecular breadboard circuits.

Cell Free Expression Models

GamS modeling

For linear DNA, GamS can be used to reduce the rate of degradation of DNA and increase the expression level (see preliminary data for more information). The figure below shows the results of a preliminary model that we are developing to capture the affects of gamS.



Figure 1. protein expression as a function of gamS concentration

Personal tools