Biomod/2013/Harvard/results: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
Line 23: Line 23:
[[Image:Linker_Results.png‎]]
[[Image:Linker_Results.png‎]]


All linker variations showed a decrease in luminescence level, but they all exhibited significant decrease in activity when exposed to high concentration of calcium. Unfortunately, the protein switch does not respond to increased levels of M13,  
All linker variations showed a decrease in luminescence level, but they all exhibited significant decrease in activity when exposed to high concentration of calcium. Unfortunately, the protein switch does not respond to increased levels of M13, but this is a promising start for continued modification to the output domain.
</div>
</div>

Revision as of 17:13, 20 October 2013

<html>

<head>

<link href='http://fonts.googleapis.com/css?family=Open+Sans' rel='stylesheet' type='text/css'>

</head>



<style>

body {

 font-family: 'Open Sans', sans-serif;
 overflow-y: scroll;

}

.container {

 background-color: #ffffff;
 margin-top:0px

} .OWWNBcpCurrentDateFilled { display: none; }

h1 {

 font-size: 36px;
 line-height: 36px;
 padding-top: 5px;
 border-bottom-width: 0;

}

h3 {

 font-size: 18px;

}


h5 {

 font-family: 'Open Sans', sans-serif;
 font-size: 11px;
 font-style: normal;
 text-align: center;
 margin:0px;
 padding:0px;

}

  1. column-content

{

 /* Uncomment to Dewikify 
 width: 0px; 
 float: left; */
 margin: 0 0 0 0;
 padding: 0;

} .firstHeading {

 display:none;
 width:0px;

}

  1. column-one

{

 display:none; 
 width:0px;
 padding-top: 35px;
 background-color: #ffffff;

}

  1. globalWrapper

{

 width: 900px;
 background-color: #ffffff;
 margin-left: auto;
 margin-right: auto

}

  1. content

{

 margin-left: 0px;
 margin-top: 0px;
 padding-top: 0px;
 align: center;
 /*padding: 12px 12px 12px 12px;
  width: 30%;
 background-color: #ffffff; border: 0; */
 

}

  1. bodyContent

{

 width: 850px;
 align: center;
 background-color: #fffffff;

}

  1. column-content

{

 width: 900px;
 background-color: #ffffff;

}

  1. footer

{

 position: center;
 width: 900px;

} @media screen {

   body { background: #000000 0 0 no-repeat;  /* changed default background */ }

}

  1. menu

{

 align: left;
 width: 10em;
 padding: 0px 10px 10px 10px;
 background-color: #FFFFFF;
 float: left;

}

  1. pagecontent

{

 width: 620px;
 min-height: 400px;
 float: left;
 margin-left: 0px;

}

.group:after {

 content: "";
 display: table;
 clear: both;

}

.editsection {

 /*display: none*/  

}




a:link {color:#FF6060;} a:active {color:#B24343; } a:hover {color:#B24343; text-decoration: none} a:visited {color:#FF6060;} /* visited link */

/*Expanding list*/

  1. exp { list-style: none; }
  1. exp li {
 height: 1.8em; 
 border-top: 1px solid #dedede;
 margin: 0 0 0 0;
 padding-top: .2em

}

  1. exp li:hover { background-color: #F8F8F8}
  2. exp li a:hover { display: block }

</style> </html>

Results

Input

Input results

Output

Cysteine Mutations

Linker Variations

Another possibility we explored was varying the linker length and rigidity. The original GLucCam structure has amino acid strands GGGGT and GGGS as the first and second linker sequence. We explored the following linker variations:

Short-rigid: Short-flexible:

All linker variations showed a decrease in luminescence level, but they all exhibited significant decrease in activity when exposed to high concentration of calcium. Unfortunately, the protein switch does not respond to increased levels of M13, but this is a promising start for continued modification to the output domain.