Biomod/2012/Titech/Nano-Jugglers/Simulation
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::::::>back to [[Biomod/2012/Titech/Nano-Jugglers/Results#2.2._Numerical_estimation_of_the_speed_of_Biomolecular_Rocket|Results 2.2. Numerical estimation of the speed of Biomolecular Rocket]] | ::::::>back to [[Biomod/2012/Titech/Nano-Jugglers/Results#2.2._Numerical_estimation_of_the_speed_of_Biomolecular_Rocket|Results 2.2. Numerical estimation of the speed of Biomolecular Rocket]] | ||
| - | ::::::>back to [[Biomod/2012/Titech/Nano-Jugglers/Results#3.3. | + | ::::::>back to [[Biomod/2012/Titech/Nano-Jugglers/Results#3.3._Directional_control_of_the_Biomolecular_Rocket_by_the_photo-switchable_DNA_system|Results 3.3 Directional control of Biomolecular Rocket by the photo-switchable DNA system]] |
Revision as of 01:59, 28 October 2012
Simulation Models
Physical principles for simulations
- We confirm the movement of rocket on 2D plots in simulation.
- We assumed that movement of biomolecular rocket is affected by following four forces and dynamics in simulation.
1. Driving forces from Bubble detachment
Calculation for Speed
- Bubbles detachment helps Biomolecular Rocket go straightforward.
- Biomolecular rocket accelerates by a single bubble detachment every Δtd seconds .
- Bubbles detachments occur when fixed time Δtd passed.
- We defined radius changes of bubbles with time as following formula.
- Δtd is defined as the time which is required bubbles to reach its detachment radius Rd.
- We defined velocity vi produced by single detachment and Δtd as following formula.
2. Fluid resistance
- Fluid resistance decreases speed of Biomolecular Rocket.
- Fluid resistance depends on the velocity of Biomolecular Rocket and viscosity of solution.
- Resistance is defined as
- Therefore, acceleration of Biomolecular Rocket is
3. Translational Brownian displacement
- Translational Brownian movement prevents Biomolecular Rocket from going straight forward.
- This is because body of rocket is so small and smaller particles can't be controlled under Brownian Movement.
- Translational displacement by Brownian movement is described as
4. Rotatory Brownian changes
- Rotatory Brownian movement decreases the directional controllability of Biomolecular Rocket.
- Movement of Biomolecular Rocket is also much influenced by Rotatory Brownian Movement
- Rotatory changes by Brownian movement is described as


