Biomod/2011/Slovenia/BioNanoWizards/appnanoelectronics: Difference between revisions

From OpenWetWare
Jump to navigationJump to search
(New page: <html> <head> <style> #globalWrapper {width: 1000px; padding:0; border:0; margin:0 auto 0 auto;} @media screen { body { background: #E3E3E3 0 0 0 0 no-repeat; /* changed default backgrou...)
 
No edit summary
Line 484: Line 484:
<div class="entry"><big><big><big><big><span
<div class="entry"><big><big><big><big><span
  style="color: black; font-weight: bold;">Nanoelectronics</span></big></big></big></big><br>
  style="color: black; font-weight: bold;">Nanoelectronics</span></big></big></big></big><br>
<br><br>
<br>
<br>
<span style="font-family: Arial;">
<span style="font-family: Arial;">
The progressive improvement of microlitographic techniques underlined the advancement of miniaturization and high density integration of electronic components, supporting the well known Moore's law. However, many believe Moore's law is coming to a halt due to limitations of top-down approaches for device downsizing. Molecular self-assembly approach may be able to offer alternative solutions.<br><br>
The progressive improvement of microlitographic techniques underlined
Use of DNA as the template for the formation of conductive wires has already been demonstrated (and use of DNA origami as the template for carbon nanotube electronic switch has been reported (Maune, 2010).<br>
the advancement of miniaturization and high density integration of
We propose to extend application of DNA origami based on the formation of vertical stacks for nanoscale electronic components.<br><br>
electronic components, supporting the well known Moore's law. However,
Surface of DNA origami can be covered with conductive layer, such as a network of intersecting carbon nanotubes or metalized surface.<br>
many believe Moore's law is coming to a halt due to limitations of
Vertical DNA origami stacks allow us to arrange two or more conductive surfaces and separate them by a defined distance.<br>
top-down approaches for device downsizing. Molecular self-assembly
Separation of two conductive surfaces by a dielectric constitutes a capacitor. Therefore vertical stack of conductive DNA origami separated by a dielectric functions as a nanoscale capacitor.<br></span>
approach may be able to offer alternative solutions.<br>
<br>
Use of DNA as the template for the formation of conductive wires has
already been demonstrated (and use of DNA origami as the template for
carbon nanotube electronic switch has been reported (Maune, 2010).<br>
<br>
We propose to extend application of DNA origami based on the formation
of vertical stacks for nanoscale electronic components.<br>
<br>
Surface of DNA origami can be covered with conductive layer, such as a
network of intersecting carbon nanotubes or metalized surface.<br>
<br>
Vertical DNA origami stacks allow us to arrange two or more conductive
surfaces and separate them by a defined distance.<br>
<br>
Separation of two conductive surfaces by a dielectric constitutes a
capacitor. Therefore vertical stack of conductive DNA origami separated
by a dielectric functions as a nanoscale capacitor.<br>
</span>
<table
<table
  style="margin-top: 3px; margin-bottom: 20px; float: center; width: 100%; height: 50px;"
  style="margin-top: 3px; margin-bottom: 20px; width: 100%; height: 50px;"
  border="0" cellpadding="0" cellspacing="0">
  border="0" cellpadding="0" cellspacing="0">
   <tbody>
   <tbody>
     <tr>
     <tr>
       <td style="text-align: center;"><img
       <td style="text-align: center;"><img
  style="font-family: Arial; width: 887px; height: 285px; padding: 0 0 10px 0;" alt=""
  style="padding: 0pt 0pt 10px; font-family: Arial; width: 887px; height: 285px;"
alt=""
  src="http://openwetware.org/images/d/d1/Nanocapacitorfinal.png"></td>
  src="http://openwetware.org/images/d/d1/Nanocapacitorfinal.png"></td>
     </tr>
     </tr>
     <tr style="font-family: Arial;">
     <tr style="font-family: Arial;">
       <td style="text-align: justify;"><span
       <td style="text-align: justify;"><span
  style="font-weight: bold;">Figure 1: Schematic representation of a nanoscale capacitor based on the vertical DNA origami stack.</span> Both layers of DNA origami are covered with a conductive layer. In this illustration a percolating network of carbon nanotubes covers one surface of each plate, which can be achieved through incorporation of single-stranded extensions of staples into one surface of each DNA origami. Tethers between two conductive layers can be either DNA or using protein tethers (as shown here), the latter being probably more rigid and serve as isolator. The dielectric layer between the two conductive plates could be filled with a nonpolar polymer such as e.g. lipid bilayer, which could self-assemble to the surface of a DNA layer via headgroup interactions.</td>
  style="font-weight: bold;">Figure 1: Schematic
representation of a nanoscale capacitor based on the vertical DNA
origami stack.</span> Both layers of DNA origami are covered with
a conductive layer. In this illustration a percolating network of
carbon nanotubes covers one surface of each plate, which can be
achieved through incorporation of single-stranded extensions of staples
into one surface of each DNA origami. Tethers between two conductive
layers can be either DNA or using protein tethers (as shown here), the
latter being probably more rigid and serve as isolator. The dielectric
layer between the two conductive plates could be filled with a nonpolar
polymer such as e.g. lipid bilayer, which could self-assemble to the
surface of a DNA layer via headgroup interactions.</td>
     </tr>
     </tr>
   </tbody>
   </tbody>
</table>
</table>
<span style="font-family: Arial;">
<span style="font-family: Arial;">
In a similar way we could fabricate a nanoscale battery from a combination of two DNA origami plates covered by different materials for the appropriate combination of cathode and electrode, in this case with a conductive electrolyte between them. We envisioned that the design could be improved by the use of the additional third DNA origami layer, positioned between cathode and anode. The central DNA origami layer functions as an ion permeable membrane that prevents shortcircuiting of the conductive material deposited on each of the two side layers.</span><br><br>
In a similar way we could fabricate a nanoscale battery from a
combination of two DNA origami plates covered by different materials
for the appropriate combination of cathode and electrode, in this case
with a conductive electrolyte between them. We envisioned that the
design could be improved by the use of the additional third DNA origami
layer, positioned between cathode and anode. The central DNA origami
layer functions as an ion permeable membrane that prevents
shortcircuiting of the conductive material deposited on each of the two
side layers.</span><br>
<br>
<table
<table
  style="margin-top: 3px; margin-bottom: 20px; float: center; width: 100%; height: 50px;"
  style="margin-top: 3px; margin-bottom: 20px; width: 100%; height: 50px;"
  border="0" cellpadding="0" cellspacing="0">
  border="0" cellpadding="0" cellspacing="0">
   <tbody>
   <tbody>
     <tr>
     <tr>
       <td style="text-align: center;"><img
       <td style="text-align: center;"><img
  style="font-family: Arial; width: 855px; height: 260px; padding: 0 0 10px 0;" alt=""
  style="padding: 0pt 0pt 10px; font-family: Arial; width: 855px; height: 260px;"
alt=""
  src="http://openwetware.org/images/6/65/Nanobateryfinal.png"></td>
  src="http://openwetware.org/images/6/65/Nanobateryfinal.png"></td>
     </tr>
     </tr>
     <tr style="font-family: Arial;">
     <tr style="font-family: Arial;">
       <td style="text-align: justify;"><span
       <td style="text-align: justify;"><span
  style="font-weight: bold;">Figure 2: Schematic representation of a nanoscale battery based on the vertical DNA origami stack.</span> Top and bottom layer of DNA origami are separately covered with different materials that compose the cathode and anode. Both electrodes self-assemble into a three-layered vertical stack using protein tethers with an intervening DNA origami layer that provides the permeable membrane separating the cathode and anode compartments.</td>
  style="font-weight: bold;">Figure 2: Schematic
representation of a nanoscale battery based on the vertical DNA origami
stack.</span> Top and bottom layer of DNA origami are separately
covered with different materials that compose the cathode and anode.
Both electrodes self-assemble into a three-layered vertical stack using
protein tethers with an intervening DNA origami layer that provides the
permeable membrane separating the cathode and anode compartments.</td>
     </tr>
     </tr>
   </tbody>
   </tbody>
</table>
</table>
<span style="font-family: Arial;">
<span style="font-family: Arial;">
In addition to those two devices vertical stacks could be used as masks for the nanolitography for the deposition of a pattern of different materials onto different layers. Nanoscale dimensions and self-assembly process make those ideas potentially very appealing for technological applications, since there is an need for massively produced miniaturized tags and other electronic and optical nanodevices.</span><br><br>
In addition to those two devices vertical stacks could be used as masks
 
for the nanolitography for the deposition of a pattern of different
<strong>REFERENCES</strong>
materials onto different layers. Nanoscale dimensions and self-assembly
Maune HT, Han SP, Barish RD, Bockrath M, Goddard III WA, Rothemund PW, Winfree E (2010) Self-assembly of carbon nanotubes into two-dimensional geometries using DNA origami templates. <em>Nat. Nanotechnol.<em> 5:61-6.
process make those ideas potentially very appealing for technological
 
applications, since there is an need for massively produced
</div>
miniaturized tags and other electronic and optical nanodevices.</span><br>
<br>
<hr style="width: 100%; height: 2px;"><br>
<ul>
  <li><small>Maune HT, Han SP, Barish RD, Bockrath M,
Goddard III WA, Rothemund PW, Winfree E (2010) Self-assembly of carbon
nanotubes into two-dimensional geometries using DNA origami templates. </small><em><small>Nat.
Nanotechnol.</small><em><small> 5:61-6.</small></em></em></li>
</ul>
<em><em></em></em></div>
</div>
</div>
</div>
</div>
<!-- end #content -->
<!-- end #content -->
<div style="clear: both;">&nbsp;</div>
<div style="clear: both;"><em><em>&nbsp;</em></em></div>
</div>
</div>
<!-- end #page --></div>
<!-- end #page --></div>
Line 540: Line 596:
<div id="footer-bg">
<div id="footer-bg">
<table
<table
  style="width: 100%; text-align: left; margin-left: auto; margin-right: auto; margin-bottom:30px;"
  style="width: 100%; text-align: left; margin-left: auto; margin-right: auto; margin-bottom: 30px;"
  border="0" cellpadding="2" cellspacing="2">
  border="0" cellpadding="2" cellspacing="2">
   <tbody>
   <tbody>
Line 555: Line 611:
   </tbody>
   </tbody>
</table>
</table>
</div>
</div>
</div>
</div>
<div id="footerCSS">
<div id="footerCSS">
<p>BioNanoWizards - BioMod 2011 team Slovenia. Design
<p><em><em>BioNanoWizards - BioMod 2011 team
Slovenia. Design
by <a href="http://www.freecsstemplates.org/">Free CSS
by <a href="http://www.freecsstemplates.org/">Free CSS
Templates</a>.</p>
Templates</a>.</em></em></p>
</div>
</div>
<!-- end #footer -->
<!-- end #footer -->
</body>
</body>
</html>
</html>

Revision as of 17:44, 1 November 2011

<html> <head>

 <style>
  1. globalWrapper {width: 1000px; padding:0; border:0; margin:0 auto 0 auto;}

@media screen { body { background: #E3E3E3 0 0 0 0 no-repeat; /* changed default background */ } }

  1. column-one {display:none; width:0px;}
  2. contentSub {display:none; width:0px;}
  3. column-content {border:0px; width: 1000px; padding:0; margin:0;}

.firstHeading {display:none;}

  1. footer {display:none;}
  2. content {background-color: #e3e3e3; border:0; padding:0; margin:0;}
  3. bodyContent {background: none; border:0x; padding0; margin:0;}
  4. header{display:none;}
 </style>
 <style type="text/css">

/* Design by Free CSS Templates http://www.freecsstemplates.org Released for free under a Creative Commons Attribution 2.5 License

  • /

body { margin: 0; padding:0; background: #E3E3E3; font-family: Arial, Helvetica, sans-serif; font-size: 12px; color: #616161; } p, ul, ol { margin-top: 0; line-height: 180%; } ul, ol { } a { text-decoration: none; color: #274775; } a:hover { }

  1. wrapper {

margin: 0 auto; padding: 0; } .container { width: 1000px; margin: 0px auto; } /* Header */

  1. headercss {

width: 900px; height: 150px; margin: 0 auto; padding: 0px 50px; background: url(http://openwetware.org/images/c/cc/Img01.PNG) no-repeat left top; position: relative; z-index:10; } /* Logo */

  1. logo {

width: 800px; margin: 0 0 0 0; padding: 30px 0 0 0; }

  1. logolinknabiomod {

width: 800px; margin: 0 0 0 0; padding: 0 0 0 0; }

  1. logolinknabiomod h1, #logo p {

}

  1. logolinknabiomod h1 {

padding: 60px 0px 0px 0px; letter-spacing: -2px; font-size: 3.8em; background: none; }

  1. logolinknabiomod p {

margin: 0 0 0 0; padding: 0 0 0 0; letter-spacing: -1px; font: normal 14px Georgia, "Times New Roman", Times, serif; font-style: normal; color: #8e8e8e; } #logolinknabiomod p a { color: #8E8E8E; }

  1. logolinknabiomod a {

border: none; background: none; text-decoration: none; } /* Splash */

  1. splash {

height: 300px; } /* Menu */ /* Page */

  1. page {

width: 890px; margin: 0 auto; padding: 30px 55px; background: url(http://openwetware.org/images/e/e6/Lepidimg03.jpg) repeat-y left top; } /* Content */

  1. content {

float: left; width: 890px; padding: 0px 0px 0px 0px; background: none; } .post .entry { text-align: justify; font: Arial; letter-spacing: 0px; z-index:5; } /* Three Column Footer Content */

  1. footer-content {

background: url(http://openwetware.org/images/e/e3/Img04brezcrne.JPG) repeat-y left top; color: #BFBFBF; }

  1. footer-bg {

overflow: hidden; width: 890px; padding: 10px 55px 80px 55px; background: url(http://openwetware.org/images/0/06/Footerbrezozadja.jpg) no-repeat left bottom; }

  1. footer-content h2 {

margin: 0px; padding: 0px 0px 20px 0px; letter-spacing: -1px; text-transform: lowercase; font-size: 26px; color: #202020; }

  1. footer-content ul {

margin: 0px; padding: 0px 0px 0px 0px; }

  1. footer-content a {

color: #447ECF; }

  1. column1 {

float: left; width: 423px; margin: 0px 0px 0px 0px; text-align: justify; }

  1. column2 {

float: right; width: 423px; margin: 0px 0px 0px 0px; text-align: justify; } /* Footer */

  1. footerCSS {

height: 20px; width: 600px; padding: 0px 200px 0px 200px; font-family: Arial, Helvetica, sans-serif; }

  1. footerCSS p {

margin: 0; padding-top: 0px; line-height: normal; font-size: 9px; text-align: center; color: #202020; }

  1. footerCSS a {

color: #202020; }

  1. marketing {

overflow: hidden; margin-bottom: 30px; padding: 20px 0px 10px 0px; border-top: 1px solid #E3E3E3; border-bottom: 1px solid #E3E3E3; }

  1. marketing .text1 {

float: left; margin: 0px; padding: 0 0 0 100px; font-size: 34px; color: #345E9B; }

  1. marketing .text2 {

float: right; }

  1. marketing .text2 a {

display: block; width: 252px; height: 38px; padding: 15px 100px 0px 0px; background: url(http://openwetware.org/images/f/f4/Lepidimg07.jpg) no-repeat left top; letter-spacing: -2px; text-align: center; font-size: 30px; color: #ffffff; }

  1. jebenimeni {

width: 800px; height: 30px; padding: 45px 0 0 0;} <!-- Start PureCSSMenu.com STYLE -->

  1. pcm{display:none;}

ul.pureCssMenu ul{display:none} ul.pureCssMenu li:hover>ul{display:block} ul.pureCssMenu ul{position: absolute;left:-1px;top:98%;} ul.pureCssMenu ul ul{position: absolute;left:98%;top:-2px;} ul.pureCssMenu,ul.pureCssMenu ul { margin:0px; list-style:none; padding:0px 2px 2px 0px; background-color:#2A4B7D; background-repeat:repeat; border-color:#cccccc #111111 #111111 #cccccc; border-width:1px; border-style:solid; } ul.pureCssMenu table {border-collapse:collapse}ul.pureCssMenu { display:block; zoom:1; float: left; } ul.pureCssMenu ul{ width:260.40000000000003px; } ul.pureCssMenu li{ display:block; margin:2px 0px 0px 2px; font-size:0px; } ul.pureCssMenu a:active, ul.pureCssMenu a:focus { outline-style:none; } ul.pureCssMenu a, ul.pureCssMenu li.dis a:hover, ul.pureCssMenu li.sep a:hover { display:block; vertical-align:middle; background-color:#2A4B7D; border-width:1px; border-color:#2A4B7D; border-style:solid; text-align:left; text-decoration:none; padding:2px 5px 2px 10px; _padding-left:0; font:16px Trebuchet MS; color: #ffffff; text-decoration:none; cursor:default; } ul.pureCssMenu span{ overflow:hidden; } ul.pureCssMenu li { float:left; } ul.pureCssMenu ul li { float:none; } ul.pureCssMenu ul a { text-align:left; white-space:nowrap; } ul.pureCssMenu li.sep{ text-align:left; padding:0px; line-height:0; height:100%; } ul.pureCssMenu li.sep span{ float:none; padding-right:0; width:3px; height:100%; display:inline-block; background-color:#cccccc #111111 #111111 #cccccc; background-image:none;} ul.pureCssMenu ul li.sep span{ width:100%; height:3px; } ul.pureCssMenu li:hover{ position:relative; } ul.pureCssMenu li:hover>a{ background-color:#377D9F; border-color:#377D9F; border-style:solid; font:16px Trebuchet MS; color: #FFFFFF; text-decoration:none; } ul.pureCssMenu li a:hover{ position:relative; background-color:#377D9F; border-color:#377D9F; border-style:solid; font:16px Trebuchet MS; color: #FFFFFF; text-decoration:none; } ul.pureCssMenu li.dis a { color: #666 !important; } ul.pureCssMenu img {border: none;float:left;_float:none;margin-right:2px;width:16px; height:16px; } ul.pureCssMenu ul img {width:16px; height:16px; } ul.pureCssMenu img.over{display:none} ul.pureCssMenu li.dis a:hover img.over{display:none !important} ul.pureCssMenu li.dis a:hover img.def {display:inline !important} ul.pureCssMenu li:hover > a img.def {display:none} ul.pureCssMenu li:hover > a img.over {display:inline} ul.pureCssMenu a:hover img.over,ul.pureCssMenu a:hover ul img.def,ul.pureCssMenu a:hover a:hover ul img.def,ul.pureCssMenu a:hover a:hover img.over,ul.pureCssMenu a:hover a:hover a:hover img.over{display:inline} ul.pureCssMenu a:hover img.def,ul.pureCssMenu a:hover ul img.over,ul.pureCssMenu a:hover a:hover ul img.over,ul.pureCssMenu a:hover a:hover img.def,ul.pureCssMenu a:hover a:hover a:hover img.def{display:none} ul.pureCssMenu a:hover ul,ul.pureCssMenu a:hover a:hover ul{display:block} ul.pureCssMenu a:hover ul ul{display:none} ul.pureCssMenu span{ display:block; background-image:url(http://openwetware.org/images/5/50/Arr_white.gif); background-position:right center; background-repeat: no-repeat; padding-right:12px;} ul.pureCssMenu li:hover>a>span{ background-image:url(http://openwetware.org/images/6/6f/Arrv_white.gif); } ul.pureCssMenu a:hover span{ _background-image:url(http://openwetware.org/images/6/6f/Arrv_white.gif)} ul.pureCssMenu ul span,ul.pureCssMenu a:hover table span{background-image:url(http://openwetware.org/images/5/50/Arr_white.gif)} <!-- End PureCSSMenu.com STYLE -->

 </style>

</head> <body> <div id="wrapper"> <div id="headercss" class="container"> <div id="logo"> <div id="logolinknabiomod"> <p><a href="http://openwetware.org/wiki/Biomod/2011">&lt;-- Back to BioMod 2011</a></p> </div> <div id="jebenimeni"> <!-- Start PureCSSMenu.com MENU --> <ul class="pureCssMenu pureCssMenum">

 <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards">Home</a></li>
 <li class="pureCssMenui"><a class="pureCssMenui"
href="#"><span>Idea</span></a><!--[if lte IE 6]><table><tr><td><![endif]-->
   <ul class="pureCssMenum">
     <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/ideastateoftheart">State

of the art</a></li>

     <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/ideaproteinaddons">Protein

add-ons</a></li> <!-- TUKI SEM IZBRISAL PROTEIN CHIMERAS -->

     <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/ideaverticalstacks">Vertical

stacks</a></li>

   </ul>

<!--[if lte IE 6]></td></tr></table></a><![endif]--></li>

 <li class="pureCssMenui"><a class="pureCssMenui"
href="#"><span>Results</span></a><!--[if lte IE 6]><table><tr><td><![endif]-->
   <ul class="pureCssMenum">
     <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/resultssummary">Summary</a></li>
     <li class="pureCssMenui"><a class="pureCssMenui"
href="#"><span>Protein add-ons</span></a><!--[if lte IE 6]><table><tr><td><![endif]-->
       <ul class="pureCssMenum">
         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/resultssolublezfp">Soluble

ZFPs</a></li>

         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/resultstightbindingzfp">Tight

binding ZFPs</a></li>

         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/resultsfunctionalizedzfp">Functionalized

ZFPs</a></li>

         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/protdnahybrid">Protein-DNA

origami hybrid</a></li>

       </ul>

<!--[if lte IE 6]></td></tr></table></a><![endif]--></li>

     <li class="pureCssMenui"><a class="pureCssMenui"
href="#"><span>Vertical stacks</span></a><!--[if lte IE 6]><table><tr><td><![endif]-->
       <ul class="pureCssMenum">
         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/resultsdnatethers">DNA

tethers</a></li>

         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/resultsproteintethers">Protein

tethers</a></li>

       </ul>

<!--[if lte IE 6]></td></tr></table></a><![endif]--></li>

   </ul>

<!--[if lte IE 6]></td></tr></table></a><![endif]--></li>

 <li class="pureCssMenui"><a class="pureCssMenui"
href="#"><span>Discussion</span></a><!--[if lte IE 6]><table><tr><td><![endif]-->
   <ul class="pureCssMenum">
     <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/discussion">Discussion</a></li>
     <li class="pureCssMenui"><a class="pureCssMenui"
href="#"><span>Applications</span></a><!--[if lte IE 6]><table><tr><td><![endif]-->
       <ul class="pureCssMenum">
         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/applabonchip">Lab-on-a-nanochip</a></li>
         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/appbiosynthteticcompartments">Biosynthetic

compartments</a></li>

         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/appbiosensors">Biosensors</a></li>
         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/appnanoelectronics">Nanoelectronics</a></li>
       </ul>
     </li>
   </ul>

<!--[if lte IE 6]></td></tr></table></a><![endif]--></li>

 <li class="pureCssMenui"><a class="pureCssMenui"
href="#"><span>Methods</span></a><!--[if lte IE 6]><table><tr><td><![endif]-->
   <ul class="pureCssMenum">
     <li class="pureCssMenui"><a class="pureCssMenui"
href="#"><span>DNA origami design</span></a><!--[if lte IE 6]><table><tr><td><![endif]-->
       <ul class="pureCssMenum">
         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/methgeneraldesignstrategy">General

design strategy</a></li>

         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/methmodifications%20">Modifications</a></li>
       </ul>

<!--[if lte IE 6]></td></tr></table></a><![endif]--></li>

     <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/methplasmidconst">Plasmid

construction</a></li>

     <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/methprotprodandisol">Protein

production and isolation</a></li>

     <li class="pureCssMenui"><a class="pureCssMenui"
href="#"><span>Protein characterization</span></a><!--[if lte IE 6]><table><tr><td><![endif]-->
       <ul class="pureCssMenum">
         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/methemsa">EMSA</a></li>
         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/methalphascreen">AlphaScreen

assay</a></li>

         <li class="pureCssMenui"><a
class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/methbret">BRET

assay</a></li>

       </ul>

<!--[if lte IE 6]></td></tr></table></a><![endif]--></li>

     <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/methafm">AFM</a></li>
     <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/methtimeline">Timeline</a></li>
   </ul>

<!--[if lte IE 6]></td></tr></table></a><![endif]--></li>

 <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/team">Team</a></li>
 <li class="pureCssMenui"><a class="pureCssMenui"
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/acknowledgments">Acknowledgments</a></li>

</ul> <!-- End PureCSSMenu.com MENU --> </div> </div> </div> <!-- end #header --> <div id="page" class="container"> <div id="content"> <div class="post"> <div class="entry"><big><big><big><big><span

style="color: black; font-weight: bold;">Nanoelectronics</span></big></big></big></big><br>

<br> <br> <span style="font-family: Arial;"> The progressive improvement of microlitographic techniques underlined the advancement of miniaturization and high density integration of electronic components, supporting the well known Moore's law. However, many believe Moore's law is coming to a halt due to limitations of top-down approaches for device downsizing. Molecular self-assembly approach may be able to offer alternative solutions.<br> <br> Use of DNA as the template for the formation of conductive wires has already been demonstrated (and use of DNA origami as the template for carbon nanotube electronic switch has been reported (Maune, 2010).<br> <br> We propose to extend application of DNA origami based on the formation of vertical stacks for nanoscale electronic components.<br> <br> Surface of DNA origami can be covered with conductive layer, such as a network of intersecting carbon nanotubes or metalized surface.<br> <br> Vertical DNA origami stacks allow us to arrange two or more conductive surfaces and separate them by a defined distance.<br> <br> Separation of two conductive surfaces by a dielectric constitutes a capacitor. Therefore vertical stack of conductive DNA origami separated by a dielectric functions as a nanoscale capacitor.<br> </span> <table

style="margin-top: 3px; margin-bottom: 20px; width: 100%; height: 50px;"
border="0" cellpadding="0" cellspacing="0">
 <tbody>
   <tr>
     <td style="text-align: center;"><img
style="padding: 0pt 0pt 10px; font-family: Arial; width: 887px; height: 285px;"
alt=""
src="http://openwetware.org/images/d/d1/Nanocapacitorfinal.png"></td>
   </tr>
   <tr style="font-family: Arial;">
     <td style="text-align: justify;"><span
style="font-weight: bold;">Figure 1: Schematic

representation of a nanoscale capacitor based on the vertical DNA origami stack.</span> Both layers of DNA origami are covered with a conductive layer. In this illustration a percolating network of carbon nanotubes covers one surface of each plate, which can be achieved through incorporation of single-stranded extensions of staples into one surface of each DNA origami. Tethers between two conductive layers can be either DNA or using protein tethers (as shown here), the latter being probably more rigid and serve as isolator. The dielectric layer between the two conductive plates could be filled with a nonpolar polymer such as e.g. lipid bilayer, which could self-assemble to the surface of a DNA layer via headgroup interactions.</td>

   </tr>
 </tbody>

</table> <span style="font-family: Arial;"> In a similar way we could fabricate a nanoscale battery from a combination of two DNA origami plates covered by different materials for the appropriate combination of cathode and electrode, in this case with a conductive electrolyte between them. We envisioned that the design could be improved by the use of the additional third DNA origami layer, positioned between cathode and anode. The central DNA origami layer functions as an ion permeable membrane that prevents shortcircuiting of the conductive material deposited on each of the two side layers.</span><br> <br> <table

style="margin-top: 3px; margin-bottom: 20px; width: 100%; height: 50px;"
border="0" cellpadding="0" cellspacing="0">
 <tbody>
   <tr>
     <td style="text-align: center;"><img
style="padding: 0pt 0pt 10px; font-family: Arial; width: 855px; height: 260px;"
alt=""
src="http://openwetware.org/images/6/65/Nanobateryfinal.png"></td>
   </tr>
   <tr style="font-family: Arial;">
     <td style="text-align: justify;"><span
style="font-weight: bold;">Figure 2: Schematic

representation of a nanoscale battery based on the vertical DNA origami stack.</span> Top and bottom layer of DNA origami are separately covered with different materials that compose the cathode and anode. Both electrodes self-assemble into a three-layered vertical stack using protein tethers with an intervening DNA origami layer that provides the permeable membrane separating the cathode and anode compartments.</td>

   </tr>
 </tbody>

</table> <span style="font-family: Arial;"> In addition to those two devices vertical stacks could be used as masks for the nanolitography for the deposition of a pattern of different materials onto different layers. Nanoscale dimensions and self-assembly process make those ideas potentially very appealing for technological applications, since there is an need for massively produced miniaturized tags and other electronic and optical nanodevices.</span><br> <br> <hr style="width: 100%; height: 2px;"><br> <ul>

 <li><small>Maune HT, Han SP, Barish RD, Bockrath M,

Goddard III WA, Rothemund PW, Winfree E (2010) Self-assembly of carbon nanotubes into two-dimensional geometries using DNA origami templates. </small><em><small>Nat. Nanotechnol.</small><em><small> 5:61-6.</small></em></em></li> </ul> <em><em></em></em></div> </div> </div> <!-- end #content --> <div style="clear: both;"><em><em>&nbsp;</em></em></div> </div> <!-- end #page --></div> <div id="footer-content" class="container"> <div id="footer-bg"> <table

style="width: 100%; text-align: left; margin-left: auto; margin-right: auto; margin-bottom: 30px;"
border="0" cellpadding="2" cellspacing="2">
 <tbody>
   <tr>
     <td style="text-align: right;"><a
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/appbiosensors"><img
alt="" style="border: 0px solid ; width: 132px; height: 39px;"
src="http://openwetware.org/images/d/d3/Previousblue.JPG"></a></td>
     <td style="text-align: left;"><a
href="http://openwetware.org/wiki/Biomod/2011/Slovenia/BioNanoWizards/methgeneraldesignstrategy"><img
alt="" style="border: 0px solid ; width: 132px; height: 39px;"
src="http://openwetware.org/images/6/69/Nextblue.JPG"></a></td>
   </tr>
 </tbody>

</table> </div> </div> <div id="footerCSS"> <p><em><em>BioNanoWizards - BioMod 2011 team Slovenia. Design by <a href="http://www.freecsstemplates.org/">Free CSS Templates</a>.</em></em></p> </div> <!-- end #footer --> </body> </html>