BioSysBio:Conference Programme With Videos: Difference between revisions
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*13.00 – 13.15 '''[http://video.google.com/videoplay?docid=8134736373670981116&hl=en Opening and Welcome]''' | *13.00 – 13.15 '''[http://video.google.com/videoplay?docid=8134736373670981116&hl=en Opening and Welcome]''' | ||
===Opening plenary speakers:=== | ===Opening plenary speakers:=== | ||
*13.15 – 14.00 '''Hans Westerhoff''' - University of Manchester - | *13.15 – 14.00 '''Hans Westerhoff''' - University of Manchester - <br> | ||
**"Systems Biology, hierarchies and robustness: bringing information to Life". | **"Systems Biology, hierarchies and robustness: bringing information to Life". | ||
*14.00– 14.45 '''Alfonso Valencia''' - Universidad Autonoma Madrid | *14.00– 14.45 '''Alfonso Valencia''' - Universidad Autonoma Madrid | ||
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*08.00 - 8.45: Breakfast | *08.00 - 8.45: Breakfast | ||
*08.45– 09.25 '''Douglas Kell''' - University of Manchester, UK | *08.45– 09.25 '''Douglas Kell''' - University of Manchester, UK | ||
** "[http://video.google.com/videoplay?docid=-262870053720891641&hl=en Metabolomics and Machine Learning for Systems Biology]" | |||
*09.25 - 09.50 '''Raul Munoz Hernandez''' - University of Manchester, UK | *09.25 - 09.50 '''Raul Munoz Hernandez''' - University of Manchester, UK | ||
**"[http://video.google.com/videoplay?docid=-4812636536087256040&hl=en Metabolic flux analysis to study the production of a non-ribosomal lipopeptide, cda, by streptomyces coelicolor]" | **"[http://video.google.com/videoplay?docid=-4812636536087256040&hl=en Metabolic flux analysis to study the production of a non-ribosomal lipopeptide, cda, by streptomyces coelicolor]" | ||
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===Session 3: Synthetic Biology and iGEM.=== | ===Session 3: Synthetic Biology and iGEM.=== | ||
*11.45– 12.15 '''Randy Rettberg''' - MIT (Massachusetts Institute of Technology), USA | *11.45– 12.15 '''Randy Rettberg''' - MIT (Massachusetts Institute of Technology), USA | ||
** [http://video.google.com/videoplay?docid=2825060788839760342 Introduction to iGEM and the Registry of Standard Biological Parts] | |||
*12.15– 12.35 '''University of Edinburgh iGEM''' , UK | *12.15– 12.35 '''University of Edinburgh iGEM''' , UK | ||
**"Modeling Arsenic Biosensor System" | **"[http://video.google.com/videoplay?docid=-847377595233069496&hl=en Modeling Arsenic Biosensor System]" | ||
*12.35– 12.55 '''iGEM Imperial College London''' | *12.35– 12.55 '''iGEM Imperial College London''' | ||
**"Engineering a synthetic molecular oscillator based on the Lotka-Volterra dynamic | **"[http://video.google.com/videoplay?docid=-5038595884600035062&hl=en Engineering a synthetic molecular oscillator based on the Lotka-Volterra dynamic]" | ||
*12.55– 13.15 '''University of Cambridge iGEM team''', UK | *12.55– 13.15 '''University of Cambridge iGEM team''', UK | ||
**Autonomous pattern formation between bacterial populations | **[http://video.google.com/videoplay?docid=440341392514433029&hl=en Autonomous pattern formation between bacterial populations] | ||
13.15– 14.15 Lunch + iGEM workshop - What do I need to do to take part in iGEM 2007? | 13.15– 14.15 Lunch + iGEM workshop - What do I need to do to take part in iGEM 2007? | ||
===Session 4: Modeling and databases in systems Biology.=== | ===Session 4: Modeling and databases in systems Biology.=== | ||
*14.15– 14.55 '''Nicolas Le Novere''' - European Bioinformatics Institute, UK | *14.15– 14.55 '''Nicolas Le Novere''' - European Bioinformatics Institute, UK | ||
** [http://video.google.com/videoplay?docid=-1376393318880643726 Modeling and databases in systems Biology] | |||
*14.55– 15.20 '''Michael Lees''' - University of Nottingham | *14.55– 15.20 '''Michael Lees''' - University of Nottingham | ||
**"BacGrid: Simulations of Bacteria using the GRID" | **"[http://video.google.com/videoplay?docid=-3611392376318652170 BacGrid: Simulations of Bacteria using the GRID]" | ||
*15.20– 15.45''' Isabel Rojas''' - EML Research gGmbH, Heidelberg, Germany | *15.20– 15.45''' Isabel Rojas''' - EML Research gGmbH, Heidelberg, Germany | ||
"SABIO-RK: a database of biochemical reactions and their kinetics." | **"SABIO-RK: a database of biochemical reactions and their kinetics." | ||
15.45– 17.15 Break & poster session 2 | 15.45– 17.15 Break & poster session 2 | ||
| Line 57: | Line 60: | ||
===Session 5: Modeling and modularity, tools for systems biology.=== | ===Session 5: Modeling and modularity, tools for systems biology.=== | ||
*17.15– 17.55 '''Herbert Sauro''' - University of Washington, USA | *17.15– 17.55 '''Herbert Sauro''' - University of Washington, USA | ||
** "Modeling & modularity, tools for Systems Biology" | |||
*17.55– 18.20 '''Martin Hemberg''' - Imperial College London | *17.55– 18.20 '''Martin Hemberg''' - Imperial College London | ||
**"A study of the properties of stochastic genetic oscillators" | **"A study of the properties of stochastic genetic oscillators" | ||
*18.20– 18.45 '''Nuno Lages''' - Faculty of Sciences of the University of Lisbon | *18.20– 18.45 '''Nuno Lages''' - Faculty of Sciences of the University of Lisbon | ||
**"Potential role of the glyoxalase pathway as a drug target in L infantum | **"[http://video.google.com/videoplay?docid=-1804110027497651229 Potential role of the glyoxalase pathway as a drug target in L infantum]" | ||
20.00– onwards, Conference meal at Tai Wu, Manchester- sponsored by Chemical Computing Group. | 20.00– onwards, Conference meal at Tai Wu, Manchester- sponsored by Chemical Computing Group. | ||
| Line 69: | Line 73: | ||
*08.45– 09.25 '''Sarah Teichmann''' - Laboratory of Molecular Biology, Cambridge, UK | *08.45– 09.25 '''Sarah Teichmann''' - Laboratory of Molecular Biology, Cambridge, UK | ||
*09.25– 09.50 '''Sanne Abeln''' - University of Oxford | *09.25– 09.50 '''Sanne Abeln''' - University of Oxford | ||
**"Linking evolution of protein structures through fragments | **"[http://video.google.com/videoplay?docid=8528995405459519923 Linking evolution of protein structures through fragments]" | ||
*09.50– 10.15 '''Emily Jefferson''' - University of Dundee | *09.50– 10.15 '''Emily Jefferson''' - University of Dundee | ||
**"The relationship between domain-domain interaction orientation and sequence similarity" | **"[http://video.google.com/videoplay?docid=7789368425498126859 The relationship between domain-domain interaction orientation and sequence similarity]" | ||
*10.15– 10.45 Refreshments break | *10.15– 10.45 Refreshments break | ||
===Session 7: Synthetic Biology=== | ===Session 7: Synthetic Biology=== | ||
*10.45– 11.25 '''Chris Voigt''' - UCSD (University of California, San Diego) USA | *10.45– 11.25 '''Chris Voigt''' - UCSD (University of California, San Diego) USA | ||
** "Genetic System Design" | |||
*11.25– 11.50 '''James Brown''' - Univeristy of Cambridge | *11.25– 11.50 '''James Brown''' - Univeristy of Cambridge | ||
**"Navigational Control of Bacteria" | **"[http://video.google.com/videoplay?docid=1767926969034521741 Navigational Control of Bacteria]" | ||
*11.50– 12.15 '''Alfonso Jaramillo''' - Ecole Polytechnique, France | *11.50– 12.15 '''Alfonso Jaramillo''' - Ecole Polytechnique, France | ||
**"Computational Design of Proteins With New Functions" | **"[http://video.google.com/videoplay?docid=6376167468406980461 Computational Design of Proteins With New Functions]" | ||
*12.15– 13.00 Closing Plenary: '''Ron Weiss''' - Princeton University | *12.15– 13.00 Closing Plenary: '''Ron Weiss''' - Princeton University | ||
**"Developments in Synthetic Biology" | **"[http://video.google.com/videoplay?docid=-2010003542911577166 Developments in Synthetic Biology]" | ||
*13.00– 13.15 Prize giving and conference close | *13.00– 13.15 Prize giving and conference close | ||
** (for video see end of Ron Weiss' talk) | |||
Latest revision as of 08:22, 10 February 2007
BioSysBio, 11th-13th January 2007, Manchester, UK.
Programme: Thursday 11th Jan
Kick-off
- 12.00 – 13.00 Registration
- 13.00 – 13.15 Opening and Welcome
Opening plenary speakers:
- 13.15 – 14.00 Hans Westerhoff - University of Manchester -
- "Systems Biology, hierarchies and robustness: bringing information to Life".
- 14.00– 14.45 Alfonso Valencia - Universidad Autonoma Madrid
- 14.45 – 15.15 Refreshments
Session 1: Gene regulation and profiling
- 15.15 - 15.55 Roland Eils - DKFZ (German Cancer Research Centre)
- 15.55 - 16.20 Martino Barenco - Institute of Child Health UCL (University College London) -
- "rHVDM – A fast and user-friendly R package to predict transcription factor targets from microarray time series data."
- 16.20 - 16.45 Alok Mishra - Imperial College London
- 16.45 - 17.30 Rapid Fire Session
- 18.00 – 21.00 Industry Partnership Fair and Welcome party sponsored by the Doctoral Training Centre
Programme: Friday 12th Jan
Session 2: Metabolomics and machine learning: quantitative bioanalysis for systems biology
- 08.00 - 8.45: Breakfast
- 08.45– 09.25 Douglas Kell - University of Manchester, UK
- 09.25 - 09.50 Raul Munoz Hernandez - University of Manchester, UK
- 09.50 - 10.15 Daniel Mateus - CEA/List Saclay, France
10.15– 11.45 Break & poster session 1
Session 3: Synthetic Biology and iGEM.
- 11.45– 12.15 Randy Rettberg - MIT (Massachusetts Institute of Technology), USA
- 12.15– 12.35 University of Edinburgh iGEM , UK
- 12.35– 12.55 iGEM Imperial College London
- 12.55– 13.15 University of Cambridge iGEM team, UK
13.15– 14.15 Lunch + iGEM workshop - What do I need to do to take part in iGEM 2007?
Session 4: Modeling and databases in systems Biology.
- 14.15– 14.55 Nicolas Le Novere - European Bioinformatics Institute, UK
- 14.55– 15.20 Michael Lees - University of Nottingham
- 15.20– 15.45 Isabel Rojas - EML Research gGmbH, Heidelberg, Germany
- "SABIO-RK: a database of biochemical reactions and their kinetics."
15.45– 17.15 Break & poster session 2
Session 5: Modeling and modularity, tools for systems biology.
- 17.15– 17.55 Herbert Sauro - University of Washington, USA
- "Modeling & modularity, tools for Systems Biology"
- 17.55– 18.20 Martin Hemberg - Imperial College London
- "A study of the properties of stochastic genetic oscillators"
- 18.20– 18.45 Nuno Lages - Faculty of Sciences of the University of Lisbon
20.00– onwards, Conference meal at Tai Wu, Manchester- sponsored by Chemical Computing Group.
Programme: Saturday 13th Jan
- 08.00 - 8.45: Breakfast
Session 6: Gene regulatory networks, Structural and Computational Genomics.
- 08.45– 09.25 Sarah Teichmann - Laboratory of Molecular Biology, Cambridge, UK
- 09.25– 09.50 Sanne Abeln - University of Oxford
- 09.50– 10.15 Emily Jefferson - University of Dundee
- 10.15– 10.45 Refreshments break
Session 7: Synthetic Biology
- 10.45– 11.25 Chris Voigt - UCSD (University of California, San Diego) USA
- "Genetic System Design"
- 11.25– 11.50 James Brown - Univeristy of Cambridge
- 11.50– 12.15 Alfonso Jaramillo - Ecole Polytechnique, France
- 12.15– 13.00 Closing Plenary: Ron Weiss - Princeton University
- 13.00– 13.15 Prize giving and conference close
- (for video see end of Ron Weiss' talk)
