Berkeley iGEM10: Difference between revisions

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(New page: ==~~~~== EcoXho's for the first round of assembly (ecobammed into assembly vectors) 400px appropriate fragment lengths <pre> layout on ecoXho gel FRAGMENTS ...)
 
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<pre>
<pre>


layout on ecoXho gel FRAGMENTS
layout on ecoXho gel FRAGMENTS part size
1 6-2 1307 1605
1 6-2 1307 1605 35
2 6-11 1318 1605
2 6-11 1318 1605 46
3 6-2 1307 1605
3 6-2 1307 1605 35
4 6-11 1318 1605
4 6-11 1318 1605 46
5 6-4 2703 1605
5 6-4 2703 1605 1431
6 6-12 1869 1605
6 6-12 1869 1605 597
7 6-4 2703 1605
7 6-4 2703 1605 1431
8 6-12 1869 1605
8 6-12 1869 1605 597
9 6-5 1513 1605
9 6-5 1513 1605 241
10 6-13 1671 1605
10 6-13 1671 1605 399
11 6-5 1513 1605
11 6-5 1513 1605 241
12 6-13 1671 1605
12 6-13 1671 1605 399
13 6-7 3060 1605
13 6-7 3060 1605 1788
14 6-19 1500 1605
14 6-19 1500 1605 228
15 6-7 3060 1605
15 6-7 3060 1605 1788
16 6-19 1500 1605
16 6-19 1500 1605 228
17 6-22 2298 1605
17 6-22 2298 1605 1026
18 7-9 1797 1680
18 7-9 1797 1680 597
19 6-22 2298 1605
19 6-22 2298 1605 1026
20 7-10 1300 1680
20 7-10 1300 1680 100
21 6-23 1363 1605
21 6-23 1363 1605 91
22 7-11 1246 1680
22 7-11 1246 1680 46
23 6-23 1363 1605
23 6-23 1363 1605 91
24 7-13 1599 1680
24 7-13 1599 1680 399
25 6-24 #N/A 1605
25 6-24 #N/A 1605 #N/A
26 7-14 1599 1680
26 7-14 1599 1680 399
27 6-24 #N/A 1605
27 6-24 #N/A 1605 #N/A
28 7-19 1428 1680
28 7-19 1428 1680 228
29 7-2 1235 1680
29 7-2 1235 1680 35
30 7-23 1291 1680
30 7-23 1291 1680 91
31 7-5 1441 1680
31 7-5 1441 1680 241
32 7-24 #N/A 1680
32 7-24 #N/A 1680 #N/A
33 7-24 #N/A 1680
33 7-24 #N/A 1680 #N/A
34 5-23 1291 1473
34 5-23 1291 1473 91
35 5-3 1233 1473
35 5-3 1233 1473 33
36 5-23 1291 1473
36 5-23 1291 1473 91
37 5-3 1233 1473
37 5-3 1233 1473 33
38 8-1 1307 1473
38 8-1 1307 1473 35
39 5-8 2444 1473
39 5-8 2444 1473 1244
40 8-1 1307 1473
40 8-1 1307 1473 35
41 5-8 2444 1473
41 5-8 2444 1473 1244
42 8-4 2703 1473
42 8-4 2703 1473 1431
43 5-15 1290 1473
43 5-15 1290 1473 90
44 8-4 2703 1473
44 8-4 2703 1473 1431
45 5-20 2023 1473
45 5-20 2023 1473 823
46 8-6 1591 1473
46 8-6 1591 1473 319
47 5-20 2023 1473
47 5-20 2023 1473 823
48 8-6 1591 1473
48 8-6 1591 1473 319
1 8-17 3117 1473
1 8-17 3117 1473 1845
2 4-10 1166 1679
2 4-10 1166 1679 100
3 8-17 3117 1473
3 8-17 3117 1473 1845
4 4-10 1166 1679
4 4-10 1166 1679 100
5 8-18 3090 1473
5 8-18 3090 1473 1818
6 4-16 1156 1679
6 4-16 1156 1679 90
7 8-18 3090 1473
7 8-18 3090 1473 1818
8 4-16 1156 1679
8 4-16 1156 1679 90
9 8-21 1504 1473
9 8-21 1504 1473 232
10 4-17 2911 1679
10 4-17 2911 1679 1845
11 8-21 1504 1473
11 8-21 1504 1473 232
12 4-17 2911 1679
12 4-17 2911 1679 1845
13 4-9 1663 1679
13 4-9 1663 1679 597
14 4-18 2884 1679
14 4-18 2884 1679 1818
15 4-9 1663 1679
15 4-9 1663 1679 597
16 4-18 2884 1679
16 4-18 2884 1679 1818
17 9-3 1099 1605
17 9-3 1099 1605 33
18 9-20 1889 1605
18 9-20 1889 1605 823
19 9-3 1099 1605
19 9-3 1099 1605 33
20 9-20 1889 1605
20 9-20 1889 1605 823
21 9-8 2310 1605
21 9-8 2310 1605 1244
22 9-23 1157 1605
22 9-23 1157 1605 91
23 9-8 2310 1605
23 9-8 2310 1605 1244
24 9-23 1157 1605
24 9-23 1157 1605 91
25 9-11 1112 1605
25 9-11 1112 1605 46
26
26
27 9-11 1112 1605
27 9-11 1112 1605 46
28
28
29 9-13 1465 1605
29 9-13 1465 1605 399
30
30
31 9-13 1465 1605
31 9-13 1465 1605 399
32
32
33
33
34
34
35
35
36
 
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</pre>
</pre>

Revision as of 16:59, 1 June 2010

Tim Hsiau 16:16, 1 June 2010 (EDT)

EcoXho's for the first round of assembly (ecobammed into assembly vectors)


appropriate fragment lengths 


layout on ecoXho gel		FRAGMENTS		part size
1	6-2	1307	1605	35
2	6-11	1318	1605	46
3	6-2	1307	1605	35
4	6-11	1318	1605	46
5	6-4	2703	1605	1431
6	6-12	1869	1605	597
7	6-4	2703	1605	1431
8	6-12	1869	1605	597
9	6-5	1513	1605	241
10	6-13	1671	1605	399
11	6-5	1513	1605	241
12	6-13	1671	1605	399
13	6-7	3060	1605	1788
14	6-19	1500	1605	228
15	6-7	3060	1605	1788
16	6-19	1500	1605	228
17	6-22	2298	1605	1026
18	7-9	1797	1680	597
19	6-22	2298	1605	1026
20	7-10	1300	1680	100
21	6-23	1363	1605	91
22	7-11	1246	1680	46
23	6-23	1363	1605	91
24	7-13	1599	1680	399
25	6-24	#N/A	1605	#N/A
26	7-14	1599	1680	399
27	6-24	#N/A	1605	#N/A
28	7-19	1428	1680	228
29	7-2	1235	1680	35
30	7-23	1291	1680	91
31	7-5	1441	1680	241
32	7-24	#N/A	1680	#N/A
33	7-24	#N/A	1680	#N/A
34	5-23	1291	1473	91
35	5-3	1233	1473	33
36	5-23	1291	1473	91
37	5-3	1233	1473	33
38	8-1	1307	1473	35
39	5-8	2444	1473	1244
40	8-1	1307	1473	35
41	5-8	2444	1473	1244
42	8-4	2703	1473	1431
43	5-15	1290	1473	90
44	8-4	2703	1473	1431
45	5-20	2023	1473	823
46	8-6	1591	1473	319
47	5-20	2023	1473	823
48	8-6	1591	1473	319
				
				
				
1	8-17	3117	1473	1845
2	4-10	1166	1679	100
3	8-17	3117	1473	1845
4	4-10	1166	1679	100
5	8-18	3090	1473	1818
6	4-16	1156	1679	90
7	8-18	3090	1473	1818
8	4-16	1156	1679	90
9	8-21	1504	1473	232
10	4-17	2911	1679	1845
11	8-21	1504	1473	232
12	4-17	2911	1679	1845
13	4-9	1663	1679	597
14	4-18	2884	1679	1818
15	4-9	1663	1679	597
16	4-18	2884	1679	1818
17	9-3	1099	1605	33
18	9-20	1889	1605	823
19	9-3	1099	1605	33
20	9-20	1889	1605	823
21	9-8	2310	1605	1244
22	9-23	1157	1605	91
23	9-8	2310	1605	1244
24	9-23	1157	1605	91
25	9-11	1112	1605	46
26				
27	9-11	1112	1605	46
28				
29	9-13	1465	1605	399
30				
31	9-13	1465	1605	399
32				
33				
34				
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