BME103:W930 Group5 l2: Difference between revisions

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| [[Image:Photo_(1).JPG|100px|thumb|Name: Malik McLaurin<br>Role(s): Open PCR Machine Engineer]]
| [[Image:Photo_(1).JPG|100px|thumb|Name: Malik McLaurin<br>Role(s): Open PCR Machine Engineer]]
| [[Image:IMG_1946.jpg|100px|thumb|Name: Dana McElwain<br>Role(s): Open PCR Machine Engineer]]
| [[Image:IMG_1946.jpg|100px|thumb|Name: Dana McElwain<br>Role(s): Open PCR Machine Engineer]]
| [[Image:008.jpg|100px|thumb|Name: Chris Anastos<br>Roles(s): R&D Scientist
| [[Image:008.jpg|100px|thumb|Name: Chris Anastos<br>Roles(s): R&D Scientist]]
| [[Image:BME103student.jpg|100px|thumb|Name: Student<br>Role(s)]]
| [[Image:BME103student.jpg|100px|thumb|Name: Student<br>Role(s)]]
|}
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Revision as of 20:24, 27 November 2012

BME 103 Fall 2012 Home
People
Lab Write-Up 1
Lab Write-Up 2
Lab Write-Up 3
Course Logistics For Instructors
Photos
Wiki Editing Help

OUR TEAM

Name: Andrea Carpenter
Role(s): Experimental Protocol Planner
Name: Malik McLaurin
Role(s): Open PCR Machine Engineer
Name: Dana McElwain
Role(s): Open PCR Machine Engineer
Name: Chris Anastos
Roles(s): R&D Scientist
Name: Student
Role(s)

LAB 2 WRITE-UP

Thermal Cycler Engineering

Our re-design is based upon the Open PCR system originally designed by Josh Perfetto and Tito Jankowski.


System Design


Key Features
The following picture is a simple change in the design of the large exterior screw located on the top of the Open PCR lid:
[IMG:screw.png]


Instructions





Protocols

Materials

Supplied in Kit

Supplies Amount
Micro Test Tubes ?
Transfer Pipettes ?
PCR Master Mix 6 samples (598.8μL total)
Positive Control Solution* 1 sample (100.0μL***)
Negative Control Solution** 1 sample (100.0μL***)
PCR Machine 1
Fluorimeter 1

(*)Positive control consists of calf thymus DNA
(**)Negative control simply consists of a blank solution of water
(***)Already mixed with PCR master mix

Included in Fluorimeter Package:

Supplies Amount
Smart phone stand 1
LCD Box 1
Light box 1
Sybr green solution 500.0μL

Components of PCR master mix:

DNA Solution Component Amount
Patient’s Template DNA* 0.2μL
10μM forward primer 1.0μL
10μM reverse primer 1.0μL
Promega GoTaq master mix 50.0μL
dH2O 47.8μL
Total 100.0μL

(*)Not actually included in kit, but must be added to the master mix by the user.

Supplied by User

Supplies Amount
Smart Phone with Camera 1
Patient's Template DNA 6 samples (0.2μL each)
External Computer 1
Image J Software 1
Open PCR Software 1
Gloves 1 pair
Lab Coat 1


PCR Protocol



DNA Measurement Protocol

Research and Development

Background on Disease Markers



Primer Design



Illustration