BME100 s2015:Group1 9amL5

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BME 100 Spring 2015 Home
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Lab Write-Up 1 | Lab Write-Up 2 | Lab Write-Up 3
Lab Write-Up 4 | Lab Write-Up 5 | Lab Write-Up 6
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OUR TEAM

Name: Shawn Striker
Name: student
Name: student
Name: student
Name: student
Name: student


LAB 5 WRITE-UP

Procedure

Smart Phone Camera Settings

  • Type of Smartphone: iPhone
    • Flash: Inactivated
    • ISO setting: N/A
    • White Balance: Auto
    • Exposure: N/A
    • Saturation: N/A
    • Contrast: N/A

Settings that are N/A: Camera is sensitive enough to get a reasonable calibration with DNA concentration


Calibration

  1. Turn on the camera on the smartphone and calibrate according to the settings above
  2. Place the smartphone in the cradle
  3. Place the cradle at a right angle to the slide
  4. Adjust the height of the fluorimeter using the plastic trays in order to take a picture of the drop sideways
  5. Adjust the distance between the cradle with the smartphone and the slide so that the cradle is at least 4 cm away from the slide
  6. Record the distance between the cradle and the slide with a ruler


  • Distance between the smart phone cradle and drop = 8cm


Solutions Used for Calibration

row 1 cell 1 row 1 cell 2 row 1 cell 3 row 1 cell 4
row 2 cell 1 row 2 cell 2 row 2 cell 3 row 2 cell 4
row 3 cell 1 row 3 cell 2 row 3 cell 3 row 3 cell 4


  • Water at pH = 8
  • SYBR Green I Solution

Placing Samples onto the Fluorimeter

  1. [Instructions: Step one, in your OWN words]
  2. [Instructions: Step two, in your own words]
  3. [Instructions: Step three, in your own words]
  4. [Instructions: Step etc., in your own words]


Data Analysis

Representative Images of Negative and Positive Samples

Positive Sample

Negative Sample

Image J Values for All Calibrator Samples

Negative Sample

Calibration curve


PCR Results Summary

  • Our positive control PCR result was ____ μg/mL
  • Our negative control PCR result was ____ μg/mL

Observed results

  • Patient _____ :
  • Patient _____ :

Conclusions

  • Patient _____ :
  • Patient _____ :




SNP Information & Primer Design

Background: About the Disease SNP


Primer Design and Testing