BME100 s2015:Group1 12pmL5: Difference between revisions

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'''Placing Samples onto the Fluorimeter'''
'''Placing Samples onto the Fluorimeter'''
# ''[ Set the micropipette to 80 microliters]''
# Set the micropipette to 80 microliters
# ''[Collect the CYBER green in the micropipette ]''
# Collect the CYBER green in the micropipette  
# ''[The light from the Fluorimeter should be shining on the first two rows of dots]''
# The light from the Fluorimeter should be shining on the first two rows of dots
# ''[Place the CYBER green in between the two dots so that the light beam goes straight through the center of the bubble of fluid]''
# Place the CYBER green in between the two dots so that the light beam goes straight through the center of the bubble of fluid
# "[Eject tip from micropipette and put a new one on]
# Eject tip from micropipette and put a new one on
# "[While still on the 80 microliter setting, collect the pcr product that has been mixed with the buffer solution]
# While still on the 80 microliter setting, collect the pcr product that has been mixed with the buffer solution
# "[Place the pcr solution inside of the CYBER green that is already on the slide]
# Place the pcr solution inside of the CYBER green that is already on the slide
# "[Close the box and take pictures]
# Close the box and take pictures


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Revision as of 14:45, 1 April 2015

BME 100 Spring 2015 Home
People
Lab Write-Up 1 | Lab Write-Up 2 | Lab Write-Up 3
Lab Write-Up 4 | Lab Write-Up 5 | Lab Write-Up 6
Course Logistics For Instructors
Photos
Wiki Editing Help


OUR TEAM

Name: student
Name: student
Name: Kaylena Conklin
Name: student
Name: student
Name: student


LAB 5 WRITE-UP

Procedure

Smart Phone Camera Settings

  • Type of Smartphone: IPhone 6 plus
    • Flash: off
    • ISO setting: automatic
    • White Balance: automatic
    • Exposure: automatic
    • Saturation: automatic
    • Contrast: automatic


Calibration
For this lab, the phone that was used was placed in a horizontal fashion. The camera was on the right side facing the drop of fluid. In an attempt to keep the phone perpendicular to the table, tape was applied to the phone and then attached to the cradle. Earphones were attached to the phone for the purpose of knowing the timing of the pictures being taken.

  • Distance between the smart phone cradle and drop = 7.5 cm


Solutions Used for Calibration

row 1 cell 1 row 1 cell 2 row 1 cell 3 row 1 cell 4
row 2 cell 1 row 2 cell 2 row 2 cell 3 row 2 cell 4
row 3 cell 1 row 3 cell 2 row 3 cell 3 row 3 cell 4



Placing Samples onto the Fluorimeter

  1. Set the micropipette to 80 microliters
  2. Collect the CYBER green in the micropipette
  3. The light from the Fluorimeter should be shining on the first two rows of dots
  4. Place the CYBER green in between the two dots so that the light beam goes straight through the center of the bubble of fluid
  5. Eject tip from micropipette and put a new one on
  6. While still on the 80 microliter setting, collect the pcr product that has been mixed with the buffer solution
  7. Place the pcr solution inside of the CYBER green that is already on the slide
  8. Close the box and take pictures


Data Analysis

Representative Images of Negative and Positive Samples


Image J Values for All Calibrator Samples


TABLE GOES HERE


Calibration curve


PCR Results Summary

  • Our positive control PCR result was ____ μg/mL
  • Our negative control PCR result was ____ μg/mL

Observed results

  • Patient _____ :
  • Patient _____ :

Conclusions

  • Patient _____ :
  • Patient _____ :




SNP Information & Primer Design

Background: About the Disease SNP


Primer Design and Testing