BIOL398-04/S15:Class Journal Week 2

Alyssa N Gomes

Reflection

1. The purpose of this assignment was to learn how to deeply analyze a scientific paper, by breaking it down into several segments, going through the vocabulary first, and then re-reading to outline. Through this process, we can learn the importance of thinking critically and using the skills utilized in this paper toward our own work.
2. Outlining this assignment came so easy to me. I was able to break it down into the segmented parts and determine which parts were important and which should be omitted. With scientific papers, there is great importance in being able to sift through the material and determine what parts contribute to the conclusion and which parts are too descriptive to need in a summary used to a wider audience.
3. What aspect of this assignment was the most challenging for you? Understanding the paper as a whole came as quite the challenge to me. I think all of the complex names of genes, and nitrogen values contributed to the complexity of me trying to scan the paper easily. I had to slowly go over every sentence to make sure I could differentiate each specific RNA coding and gene-line. Reading the figures helped out a bit, but I have to admit, my lack of biology background made it difficult to process each scientific term.
4. I still do not quite understand the actual processes used to determine the RNA expression levels and how to measure the transferase. I wish the paper had articulated more about what step-by-step means were used to put a number to these big ideas.

Alyssa N Gomes 00:14, 27 January 2015 (EST)

Lauren M. Magee

Reflection

1. What was the purpose of this assignment?
   • The purpose of this assignment was to expose us to scientific research and literature, so that in future weeks, we will be able to do our own literature reviews. Before starting any new research, you must first gain an understanding of what has been done on the topic previously. That is why literature reviews are important: to prevent us from repeating research and to assist in the development of new hypothesises. This assignment also focus on how to read research papers in order to fully understand the content.
2. What aspect of this assignment came most easily to you?
   • I found the easiest part of this assignment to be finding words in the research article that you don't know. While I do have experience in both biology and mathematics fields, there are always different vocabulary words used that I usually use context clues to find the meanings for. I appreciate though that this assignment gave us the venue to further analyze the words we didn't know and confirm their definitions from an outside source.
3. What aspect of this assignment was the most challenging for you?
   • I always find it difficult to read figures. It's not that I don't understand the information being presented, but often times the visual are hard to read and crammed into a small space of the paper. From writing my own research paper, I understand how hard it can be to include figures, because of the page limits some publications require. However, they often tend to make already challenging material even harder to interpret.
4. What (yet) do you not understand?
   • There is nothing that I have yet to understand.

Lauren M. Magee 01:00, 27 January 2015 (EST)

Lucia I. Ramirez

Reflection

What was the purpose of this assignment?

What aspect of this assignment came most easily to you?

What aspect of this assignment was the most challenging for you?

What (yet) do you not understand?

Natalie Williams

Reflection

1. What was the purpose of this assignment?
   • This assignment is a precursor to what we will be doing for the rest of the semester. We will have to read different articles and journals as a class and on our own. By doing this together, we can discuss what we learned, see how interpreted the work, and better our skills for reading scientific articles and journals. Plus, by reading this articles, we can also learn lessons which will help us improve our own scientific writing skills.
2. What aspect of this assignment came most easily to you?
   • The terms were not too difficult to understand for me. Just having taken Cell Function, some of the proteins and enzymes mentioned were very familiar such as NADPH and GDH. Plus, cell function looked at various pathways and how they are interconnected, and I could follow the concepts in this article.
3. What aspect of this assignment was the most challenging to you?
   • For me, trying to summarize the article in my own words was more difficult. As a person who has had to read a lot of scientific papers, the language is something that you get used to; however, in summarizing the results and methods, it is hard to explain in laymen's terms.
4. What (yet) do you not understand?
   • I am having trouble understanding specifically what each gene had to do with yeast and how its activity affected the overall organism.

Natalie Williams 16:42, 26 January 2015 (EST)

Back to Individual Journal

Tessa A. Morris

1. The purpose of this assignment was to become comfortable reading and understanding scientific papers. Being able to comprehend scientific papers is an important skill to have for scientists and mathematicians, because research involves discussion with peers as well as drawing on papers of the same topic.
2. The aspect of this assignment that came most easily to me was reading the scientific jargon. I am becoming increasingly more comfortable reading scientific papers, even though the language used in the papers can make reading them unnecessarily difficult.
3. The aspect of this assignment that was most challenging to me was summarizing the paper. It was such a short paper that ever sentence seemed important and I had trouble focusing my outline.
4. I am still having trouble understanding the importance of each gene. There were a lot of different genes mention in the paper that were important enough to label, but I am having trouble understanding the function of each of the genes mentioned.

Tessa A. Morris 01:28, 26 January 2015 (EST)

Kristen M. Horstmann

1. The purpose of this assignment was to help us create and refine critical reading skills for scientific articles. For the rest of the class, we will be reading and analyzing articles such as these, so this article was an introduction to that. It is important for us to strengthen these skills in order to be able to critically think about the topic presented, the findings, and the conclusion as we will likely have to sift through many articles such as this one for the rest of our scientific careers.
2. Creating and defining a list of unknown words was the easiest aspect for me. I felt like I knew a good amount of the words in this article, and could have used context clues for the ones that I did not. However, by making a list and defining them, it ensured that I truly was understanding the words and not blindly thinking of something that I was remembering incorrectly.
3. Understanding and sifting through the dense article overall was the most difficult part for me. I do not have a ton of experience reading scientific journals, only a few for chemistry and psychology. So being able to sift through the jargon, the wording, the acronyms, and different numbers was difficult the first time I read through it. This also applied to the figures. It is relatively easy to read figures and their explanations, but not so easy to understand how it applies to the article if I don't have an exceptionally strong biology background.
4. I still do not fully understand the differences in function and importance of each gene and enzyme. With my limited understanding in molecular biology, I will need to refresh and continue learning the functions of the major enzymes, proteins, amino acids, etc. That would make reading articles- like this one- much more attainable to understand and analyze.

Kristen M. Horstmann 18:01, 26 January 2015 (EST)