20.181:Assignments: Difference between revisions
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#[[Media:20181HW1.pdf | Assignment #1 PDF]] due before Sept. 14 (due on Wednesday before midnight) | #[[Media:20181HW1.pdf | Assignment #1 PDF]] due before Sept. 14 (due on Wednesday before midnight) | ||
#*[[Media:Hw1_sol.py | solution to fibonacci portion]] | #*[[Media:Hw1_sol.py | solution to fibonacci portion]] | ||
#*[[Media:Hw1_sol_UPGMA.pdf | solution to UPGMA portion]] | |||
#[[Media:20.181.hw2.pdf | Assignment #2 PDF]] due before Sept. 19 | #[[Media:20.181.hw2.pdf | Assignment #2 PDF]] due before Sept. 19 | ||
#*[[Media:hw2.txt | hw2.py: codebase for assignment #2]] (run with "python hw2.py") | #*[[Media:hw2.txt | hw2.py: codebase for assignment #2]] (run with "python hw2.py") | ||
Revision as of 20:37, 10 October 2006
Phylogenetic Inference
- Assignment #1 PDF due before Sept. 14 (due on Wednesday before midnight)
- Assignment #2 PDF due before Sept. 19
- hw2.py: codebase for assignment #2 (run with "python hw2.py")
- Example tree
- a solution
- Assignment #3 PDF due before Sept. 21,
- Hw3.py: codebase for assignment #3 run with "python hw3.py",
- Example tree in Newick form
- pdf of example tree
- smaller test tree (with answers)
- a solution
- Assignment #4 PDF due before Sept. 28
- Assignment #5 PDF due before Oct. 10
- hw5.py codebase for hw5 updated! -Sonia 19:58, 5 October 2006 (EDT)
- Example tree
- Example sequence alignment
- jukes-cantor placeholding code
- a solution
- a derivation
Molecular Modeling
- Assignment #6 PDF due before Oct. 17
