20.109(F14): Fall 2014 schedule: Difference between revisions
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|[[20.109(F14): Mod 1 Day 2 Clean and cut DNA | Clean and cut DNA]] | |[[20.109(F14): Mod 1 Day 2 Clean and cut DNA | Clean and cut DNA]] | ||
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|[[Media:20.109(F14) M1D2.pdf| Lecture]] | |[[Media:20.109(F14) M1D2.pdf| Lecture]]<br>[[Media:M1D2_SKH_F14_final.pdf | SKH Prelab]]<br>[[Media:F14_M1D2-ANS.pdf | ANS Prelab]] | ||
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| [[20.109(F14): Mod 1 Day 3 Agarose gel electrophoresis| Agarose gel electrophoresis]] | | [[20.109(F14): Mod 1 Day 3 Agarose gel electrophoresis| Agarose gel electrophoresis]] | ||
| [http://openwetware.org/wiki/20.109%28F14%29:_Mod_1_Day_1_DNA_engineering_using_PCR#For_next_week_.28Due_M1D3.29 Yes] | | [http://openwetware.org/wiki/20.109%28F14%29:_Mod_1_Day_1_DNA_engineering_using_PCR#For_next_week_.28Due_M1D3.29 Yes] | ||
| <br><font color = green><b>lab quiz today</b></font color><br> | | <br><font color = green><b>lab quiz today</b></font color><br>[[Media:M1D3_SKH_F14_final.pdf|SKH PreLab]]<br>[[Media:F14_M1D3-ANS.pdf | ANS Prelab]] | ||
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| 1 | | 1 | ||
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| [[20.109(F14): Mod 1 Day 4 DNA Ligation & Transformation| Ligation & Transformation]] | | [[20.109(F14): Mod 1 Day 4 DNA Ligation & Transformation| Ligation & Transformation]] | ||
| [http://openwetware.org/wiki/20.109%28F14%29:_Mod_1_Day_3_Agarose_gel_electrophoresis#For_next_week_.28Due_M1D4.29 Yes] | | [http://openwetware.org/wiki/20.109%28F14%29:_Mod_1_Day_3_Agarose_gel_electrophoresis#For_next_week_.28Due_M1D4.29 Yes] | ||
| <br><font color = green><b>lab quiz today</b></font color><br> | | <br><font color = green><b>lab quiz today</b></font color><br>[[Media:M1D4_Lecture_BPE-ANS.pdf | Lecture]]<br>[[Media:F14_M1D4-Lecture_corrections-additions.pdf | Lecture correc-/addi-tions]]<br> [[Media:M1D4_F14_SKH_final.pdf| SKH Prelab]]<br>[[Media:F14_M1D4-ANS.pdf | ANS Prelab]] | ||
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| [[User:Isaak E. Mueller | IM]] | | [[User:Isaak E. Mueller | IM]] | ||
| [[20.109(F14): Mod 1 Day 5 Examine candidate clones & tissue culture| Examine candidate clones and Tissue Culture]] | | [[20.109(F14): Mod 1 Day 5 Examine candidate clones & tissue culture| Examine candidate clones and Tissue Culture]] | ||
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| *Today is a long day* | | *Today is a long day*<br>[[Media:20_109_Fall_2014_Lecture_5_LDS.pdf |Prof. Samson Lecture]]<br>[[Media:M1D5_F14_SKH_final.pdf|SKH Prelab]]<br>[[Media:F14_M1D5-ANS.pdf | ANS Prelab]] | ||
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| [[20.109(F14): Mod 1 Day 6 Lipofection | Lipofection]] | | [[20.109(F14): Mod 1 Day 6 Lipofection | Lipofection]] | ||
| [[20.109(F14): Mod 1 Day 4 DNA ligations, bacterial transformations and CometChip| Yes]] | | [[20.109(F14): Mod 1 Day 4 DNA ligations, bacterial transformations and CometChip| Yes]] | ||
| <br> | | [[Media:20.109_Fall_2014_Lecture_6_LDS.pdf | Prof. Samson Lecture]]<br>[[Media:M1D6_F14_SKH_final.pdf |SKH Prelab]]<br>[[Media:F14_M1D6-ANS.pdf | ANS Prelab]] | ||
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| 1 | | 1 | ||
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| [[User:Isaak E. Mueller | IM]] | | [[User:Isaak E. Mueller | IM]] | ||
| [[20.109(F14): Mod 1 Day 7 FACS analysis| Data analysis]] | | [[20.109(F14): Mod 1 Day 7 FACS analysis| Data analysis]] | ||
| | | <br><font color = green><b>Rescheduled: lab quiz today</b></font color><br> | ||
| | | [[Media:F14_M1D7-Stachowiak.pdf | Lecture]] | ||
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| [[User:Yongjin Park| YP]] | | [[User:Yongjin Park| YP]] | ||
| [[20.109(F14): Mod 2 Day 1 Testing an engineered biological system| Testing an engineered biological system]] | | [[20.109(F14): Mod 2 Day 1 Testing an engineered biological system| Testing an engineered biological system]] | ||
| | |||
| [[Media:20.109(F14) M2D1 lecture.pdf| Lecture]]<br> [[Media:M2D1 MarkedSlides copy.pdf | NLL Prelab]]<br>[[Media:F14_M2D1-ANS.pdf | ANS Prelab]] | |||
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| 2 | | 2 | ||
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| [[20.109(F14): Mod 2 Day 2 Measuring system performance | Measuring System Performance]] | | [[20.109(F14): Mod 2 Day 2 Measuring system performance | Measuring System Performance]] | ||
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| <br><font color = green><b>lab quiz today</b></font color><br><font color = CC0000><b>M1 Abstract and Data Summary Due Fri/Sat at 5pm</b></font color><br> | | <br><font color = green><b>lab quiz today</b></font color><br><font color = CC0000><b>M1 Abstract and Data Summary Due Fri/Sat at 5pm</b></font color><br>[[Media:20.109(F14) M2D2 lecture.pdf| Lecture]]<br> [[Media:M2D2 MarkedSlides.pdf| NLL Prelab]]<br>[[Media:F14_M2D2-ANS.pdf | ANS Prelab]] | ||
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| colspan="8" | | | colspan="8" | | ||
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| [[20.109(F14): Mod 2 Day 3 Tools for system engineering | Tools for System Engineering]] | | [[20.109(F14): Mod 2 Day 3 Tools for system engineering | Tools for System Engineering]] | ||
|[http://openwetware.org/wiki/20.109%28F14%29:_Mod_2_Day_1_Testing_an_engineered_biological_system#For_Next_Week_.28Due_M2D3.29 Yes] | |[http://openwetware.org/wiki/20.109%28F14%29:_Mod_2_Day_1_Testing_an_engineered_biological_system#For_Next_Week_.28Due_M2D3.29 Yes] | ||
| | |[[Media:20.109(F14) M2D3 lecture.pdf| Lecture]]<br> [[Media:M2D3 MarkedSlides.pdf| NLL Prelab]]<br>[[Media:F14_M2D3-ANS.pdf | ANS Prelab]] | ||
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| 2 | | 2 | ||
| 4 | | 4 | ||
| Tue/Wed Oct 21/22 | | Tue/Wed Oct 21/22 | ||
| [[ | | [[User:Shannon K. Alford |SKH]] | ||
| YP | | YP | ||
| [[20.109(F14): Journal Club I| Journal Club I]] | | [[20.109(F14): Journal Club I| Journal Club I]] | ||
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| <br><font color = green><b>lab quiz today</b></font color><br> | | <br><font color = green><b>lab quiz today</b></font color><br>[[Media:M2D4_F14_SKH.pdf | SKH Lecture]]<br>[[Media:M2D4 Slides.pdf| NLL Prelab]]<br>[[Media:F14_M2D4-ANS.pdf | ANS Prelab]] | ||
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| [[20.109(F14): Mod 2 Day 5 Assessing re-tuned system | Assessing re-tuned system]] | | [[20.109(F14): Mod 2 Day 5 Assessing re-tuned system | Assessing re-tuned system]] | ||
|[http://openwetware.org/wiki/20.109%28F14%29:_Mod_2_Day_3_Tools_for_system_engineering#For_Next_Week_.28Due_M2D5.29 Yes] | |[http://openwetware.org/wiki/20.109%28F14%29:_Mod_2_Day_3_Tools_for_system_engineering#For_Next_Week_.28Due_M2D5.29 Yes] | ||
| | |[[Media:20.109(F14) M2D5 lecture.pdf| lecture]]<br> [[Media:M2D5 MarkedSlides.pdf| NLL Prelab]]<br>[[Media:F14_M2D5-ANS.pdf | ANS Prelab]] | ||
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| [[20.109(F14): Mod 2 Day 6 Readouts of DNA, Protein | Readout: DNA]] | | [[20.109(F14): Mod 2 Day 6 Readouts of DNA, Protein | Readout: DNA]] | ||
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| | |[[Media:20.109(F14) M2D6 lecture.pdf| Lecture]]<br> [[Media:M2D6 MarkedSlides.pdf| NLL Prelab]]<br>[[Media:F14_M2D6-ANS.pdf | ANS Prelab]] | ||
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| 2 | | 2 | ||
| 7 | | 7 | ||
| | | <font color = red>'''Tue/Wed Nov4/5'''</font color> | ||
| [[Natalie Kuldell | NK]]/YP | | [[Natalie Kuldell | NK]]/YP | ||
| YP | | YP | ||
| [[20.109(F14): Mod 2 Day 7 Readout of Protein | Readout: Protein]] | | [[20.109(F14): Mod 2 Day 7 Readout of Protein | Readout: Protein]] | ||
|[http://openwetware.org/wiki/20.109%28F14%29:_Mod_2_Day_5_Assessing_re-tuned_system#For_Next_Week_.28Due_M2D7.29 Yes] | |[http://openwetware.org/wiki/20.109%28F14%29:_Mod_2_Day_5_Assessing_re-tuned_system#For_Next_Week_.28Due_M2D7.29 Yes] <font color = red> FNW due 10/30 or 10/31</font color> | ||
| | | [[Media:20.109(F14) M2D7 lecture.pdf| Lecture]]<br> [[Media:M2D8 MarkedSlides.pdf| NLL Prelab]]<br>[[Media:F14_M2D7.8-ANS.pdf | ANS Prelab]] | ||
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| 2 | | 2 | ||
| 8 | | 8 | ||
| | | <font color=red>'''Thu/Fri Oct 30/31'''</font color> | ||
| [[Natalie Kuldell | NK]] | | [[Natalie Kuldell | NK]] | ||
| YP | | YP | ||
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| <br><font color = green><b>lab quiz today</b></font color><br> | | <br><font color = green><b>lab quiz today</b></font color><br> | ||
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| 3 | |||
| 1 | |||
| Thu/Fri Nov 6/7 | |||
| [[User:Abelcher| AB]] | |||
| [[User: Tahoura Samad |TSS]] | |||
| [[20.109(F14): Mod 3 Day 1 Growth of phage materials| Growth of phage materials]] | |||
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|[[Media:F14_M3D1-ANS.pdf | ANS Prelab]] | |||
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| colspan="8" | | | colspan="8" | | ||
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! colspan="4" | Veteran's Day Break Monday Nov 10 | ! colspan="4" | Veteran's Day Break Monday Nov 10 | ||
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| '''No lab | | '''No lab Tues or Wed Nov 11 or 12. <br><font color = CC0000>M2 Report Due Wednesday (11/12) at Noon </font color> <br>''' | ||
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| colspan="8" | | | colspan="8" | | ||
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| [[20.109(F14): Mod 3 Day 2 Phage nanowires| Phage nanowires]] | | [[20.109(F14): Mod 3 Day 2 Phage nanowires| Phage nanowires]] | ||
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| <br><font color = green><b>lab quiz today</b></font color><br> | | <br><font color = green><b>lab quiz today</b></font color><br> [[Media:Solar and TEM Introduction 20.109 2014.ppt| Lecture]] <br> [[Media:M3D2 MarkedSlides.pdf| NLL Prelab]] <br> [[Media:M3D2 MarkedSlides F.pdf| NLL Prelab (Friday)]] | ||
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| 3 | | 3 | ||
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| TSS | | TSS | ||
| [[20.109(F14): Mod 3 Day 3 TEM| TEM]] | | [[20.109(F14): Mod 3 Day 3 TEM| TEM]] | ||
| | | [http://openwetware.org/wiki/20.109%28F14%29:_Mod_3_Day_1_Growth_of_phage_materials#For_next_week Yes] | ||
| | | [[Media:M3D3_F14_SKH_final.pdf | SKH Prelab]]<br>[[Media:F14_M3D3-ANS.pdf | ANS Prelab]] | ||
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| [[20.109(F14): Mod 3 Day 4 Solar cell assembly| Solar cell assembly]] | | [[20.109(F14): Mod 3 Day 4 Solar cell assembly| Solar cell assembly]] | ||
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| <br><font color = green><b>lab quiz today</b></font color><br> | | <br><font color = green><b>lab quiz today</b></font color><br> [[Media:Thursday_lecture_20109.pdf| JO Lecture]] <br> [[Media:M3D4 MarkedSlides.pdf| NLL Prelab]]<br>[[Media:F14_M3D4-ANS.pdf | ANS Prelab]] | ||
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| colspan="8" | | | colspan="8" | | ||
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| [[User: Tahoura Samad |TSS]] | | [[User: Tahoura Samad |TSS]] | ||
| [[20.109(F14): Mod 3 Day 5 Solar cell testing| Solar cell testing]] | | [[20.109(F14): Mod 3 Day 5 Solar cell testing| Solar cell testing]] | ||
| | | [http://openwetware.org/wiki/20.109%28F14%29:_Mod_3_Day_3_TEM#For_next_week Yes] | ||
| <br><font color = green><b>lab quiz today</b></font color><br> | | <br><font color = green><b>lab quiz today</b></font color><br> [[Media:20.109 last solar lecture 2014.pdf| Lecture]]<br>[[Media:M3D5_SKH_F14_final.pdf | SKH Prelab]]<br>[[Media:F14_M3D5-ANS.pdf | ANS Prelab]] | ||
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Latest revision as of 10:28, 4 December 2014
| MODULE | DAY | DATE | LECTURER | TA | LAB | FNW DUE? | note | |
| Thu/Fri Sept 4/5 | SKH | IM | Orientation | * Introductory Lecture (PDF) SKH Prelab ANS Prelab |
||||
| 1 | 1 | Tue/Wed Sept 9/10 | SKH | IM | DNA engineering using PCR | Yes | Lecture lab practical quiz today SKH Prelab ANS Prelab | |
| 1 | 2 | Thu/Fri Sept 11/12 | NK | IM | Clean and cut DNA | Lecture SKH Prelab ANS Prelab | ||
| 1 | 3 | Tue/Wed Sept 16/17 | WAC lecture | IM | Agarose gel electrophoresis | Yes | lab quiz today SKH PreLab ANS Prelab | |
| 1 | Thu Sept 18 | MIT Break Friday Sept 19 | ||||||
| 1 | 4 | Tue/Wed Sept 23/24 | AS | IM | Ligation & Transformation | Yes | lab quiz today Lecture Lecture correc-/addi-tions SKH Prelab ANS Prelab | |
| 1 | 5 | Thu/Fri Sept 25/26 | LS | IM | Examine candidate clones and Tissue Culture | *Today is a long day* Prof. Samson Lecture SKH Prelab ANS Prelab | ||
| 1 | 6 | Tue/Wed Sept 30/ Oct 1 | LS | IM | Lipofection | Yes | Prof. Samson Lecture SKH Prelab ANS Prelab | |
| 1 | 7 | Thu/Fri Oct 2/3 | AS | IM | Data analysis | Rescheduled: lab quiz today |
Lecture | |
| Monday Oct 6 | M1 Methods Due 5pm | |||||||
| 2 | 1 | Tue/Wed Oct 7/8 | NK | YP | Testing an engineered biological system | Lecture NLL Prelab ANS Prelab |
||
| 2 | 2 | Thu/Fri Oct 9/10 | NK | YP | Measuring System Performance | lab quiz today M1 Abstract and Data Summary Due Fri/Sat at 5pm Lecture NLL Prelab ANS Prelab | ||
| Columbus Day Break Monday, Tues Oct 13, 14 | No lab Tues or Wed | |||||||
|---|---|---|---|---|---|---|---|---|
| 2 | 3 | Thu/Fri Oct 16/17 | NK | YP | Tools for System Engineering | Yes | Lecture NLL Prelab ANS Prelab | |
| 2 | 4 | Tue/Wed Oct 21/22 | SKH | YP | Journal Club I | lab quiz today SKH Lecture NLL Prelab ANS Prelab | ||
| 2 | 5 | Thu/Fri Oct 23/24 | NK | YP | Assessing re-tuned system | Yes | lecture NLL Prelab ANS Prelab | |
| 2 | 6 | Tue/Wed Oct 28/29 | NK | YP | Readout: DNA | Lecture NLL Prelab ANS Prelab | ||
| 2 | 7 | Tue/Wed Nov4/5 | NK/YP | YP | Readout: Protein | Yes FNW due 10/30 or 10/31 | Lecture NLL Prelab ANS Prelab | |
| 2 | 8 | Thu/Fri Oct 30/31 | NK | YP | Journal club II | lab quiz today | ||
| 3 | 1 | Thu/Fri Nov 6/7 | AB | TSS | Growth of phage materials | ANS Prelab | ||
| Veteran's Day Break Monday Nov 10 | No lab Tues or Wed Nov 11 or 12. M2 Report Due Wednesday (11/12) at Noon | |||||||
| 3 | 2 | Thu/Fri Nov 13/14 | AB | TSS | Phage nanowires | lab quiz today Lecture NLL Prelab NLL Prelab (Friday) | ||
| 3 | 3 | Tue/Wed Nov 18/19 | AB | TSS | TEM | Yes | SKH Prelab ANS Prelab | |
| 3 | 4 | Thu/Fri Nov 20/21 | AB | TSS | Solar cell assembly | lab quiz today JO Lecture NLL Prelab ANS Prelab | ||
| Thanksgiving Break Nov 25-28 | Lecture: yes, on Tuesday Nov 25th Lab: none all week! M2 Revision due Wednesday, Nov 26th 5pm | |||||||
| 3 | 5 | Tue/Wed Dec 2/3 | AB | TSS | Solar cell testing | Yes | lab quiz today Lecture SKH Prelab ANS Prelab | |
| 3 | 6 | Thu/Fri Dec 4/5 | AB | TSS | Wrap-up & data summary | M3 Data Summary Due | ||
| 3 | 7 | Tue/Wed Dec 9/10 | No lecture today. | TSS | Research proposal presentations | |||
| Thu Dec 11 (OPTIONAL) | end of term celebration... | Meet to give feedback about class at 11 AM, then lunch/party from 11:30-1 PM, 16-220 | ||||||
