20.109(F13): Mod 3 Day 3 TEM

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20.109(F13): Laboratory Fundamentals of Biological Engineering

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TEM

Today's Goal

Today we will be imaging our nanocomposites via TEM to confirm that our fabrication last week was successful.

Introduction

TEM capabilities

The Transmission Electron Microscope (TEM) enables 0.14 nm resolution by utilizing an electron beam rather than a light source as is used in optical microscopes. At this resolution, one can distinguish individual planes of atoms – making TEM an excellent materials characterization instrument. The visualization of single atoms allows one to determine many parameters that describe the structure of the material, such as crystal plane spacing. Additionally, TEMs can be equipped to perform energy-dispersive X-ray spectroscopy analysis (EDX/EDS/XEDS) or electron energy-loss spectroscopy analysis (EELS). The former, EDX, enables identification of the atomic composition of heavier elements in the material. EDX has limited detection of elements below sodium (Na) on the periodic table and no detection of elements below carbon (C). The latter, EELS, is most sensitive to lighter elements, typically from carbon to the 3d transition metals. EELS can reveal atomic composition, electronic properties of the valence and conduction band of a material, surface properties, and chemical bonding.

Although we will be using TEM for materials characterization, it should also be noted that TEM is used for the analysis of biological materials as well. Since the electron beam passes through the sample that is being examined, the sample must be sufficiently thin and sufficiently sturdy to be hit by electrons in a vacuum. Rather than imaging single atoms, biological samples display contrast of components via different densities. Areas of higher density show up as a darker color than areas of low density, creating a “shadow image."

How does a TEM work?

The principles behind transmission electron microscopy are analogous to the principles behind an optical microscope. Instead of light and glass lenses, however, the TEM utilizes an electron beam focused via electromagnetic lenses. Since the TEM utilizes an electron beam rather than visible light, the microscope must also function under a vacuum. This condition allows the electrons to remain traveling in a straight line because they have no air particles with which to collide.

Specifically, at the top of the column of a TEM, a high voltage electron beam is emitted by a cathode and focused via a condenser lens. Then the beam is transmitted through the specimen. The resulting image is then magnified through a series of electromagnetic lenses until it is recorded by a fluorescent screen or camera.

Using the TEM

We will be imaging our phage nanocomposites via TEM. To prepare for TEM, you previously deposited your samples on a TEM grid. TEM grids can be made of many kinds of materials. Each design, however, includes lines of a conductive metal which disperses the electron beam and thereby prevents destruction of the sample from the harsh beam. Our TEM grids are composed of a copper mesh with carbon mesh is strung between the grids. Once a sample has been applied to our TEM grids, we will only visualize the portions of the sample contacting the carbon mesh, along with any imperfections in the carbon mesh itself.

Protocols

Part 1 (or 2): TEM

We're fortunate to have an expert from Angie Belcher's lab who will run the TEM grids you prepared. We've reserved the 2010FEG TEM, which is located in the basement of the Koch Institute. Since the room that houses the instrument is small, we'll head over in our "supergroups," starting at about 1:30. The grids will take less than an hour to visualize and when you're not at the TEM, you should be working with your lab partner on your research proposal.
Here are some examples of the kinds of images you'll get at TEM today:

DONE!

Part 2 (or 1): Research proposal discussion

For next time

REVISE

REQUIRED ASSIGNMENT

Your team's research pre-proposal is due in lecture, M3D4. Please print out a copy of your wiki page as well as be prepared to show the page to the class and talk about it briefly. This is a great opportunity to get feedback and help with your ideas.

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