Dahlquist:Notebook/Nutrigenomics/2010/01/27

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 * style="background-color: #EEE"|[[Image:owwnotebook_icon.png|128px]] Nutrigenomics
 * style="background-color: #F2F2F2" align="center"|  |Main project page
 * style="background-color: #F2F2F2" align="center"|  |Main project page


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Dr. Dahlquist

 * Downloaded annotation files from Affymetrix web site here.
 * MOE430A Annotations, CSV format, Release 30 (9.7 MB, 11/15/09), MOE430A.na30.annot.csv.zip
 * MOE430B Annotations, CSV format, Release 30 (6.1 MB, 11/15/09), MOE430B.na30.annot.csv.zip
 * From ReadMe, file format described at this web site
 * Also downloaded ortholog files
 * MOE430A Orthologs/Homologs, CSV Format, Release 30 (6.3 MB, 11/15/09), MOE430A.na30.ortholog.csv.zip
 * MOE430B Orthologs/Homologs, CSV Format, Release 30 (3.4 MB, 11/15/09), MOE430B.na30.ortholog.csv.zip

Combining experimental data and affymetrix data

 * 1) Opened the affymetrix data
 * 2) Removed the header and the controls
 * 3) Opened the experimental data
 * 4) Removed the header and the controls and sorted it so that it would allign with the affymetrix data
 * 5) Pasted the two sets of data into one excel document so that they matched up


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