Synthetic Biology:Semantic web ontology/Web Services

Semantic Web Services

 * Semantic Web Services - daml.org
 * OWL-S Web Service Ontology is a specific OWL ontology designed to provide a framework for semantically describing such services from several perspectives (e.g., discovery, invocation, composition).
 * SWSF Semantic Web Services Framework
 * Comparison of DAML-S and BPEL4WS
 * The True Meaning of Service @ xml.com
 * If Ontology, Then Knowledge @ xml.com
 * A framework for semantic web services discovery
 * SWSI Semantic Web Services Initiative
 * Benjamin Grosof's homepage
 * Supercharging WSDL with RDF
 * WSDL-S @ w3.org
 * DynamO - Dynamic Ontologies for Services
 * The ultimate mashup -- Web services and the semantic Web, Part 1: Use and combine Web services
 * SWS Challenge - Automating Web Services Mediation Choreography and Discovery

Service-Oriented Architecture

 * Web Services - Wikipedia article
 * Top 10 Web Service FAQs
 * WebServices.org
 * Web Services Activity @ W3C
 * Service Oriented Architecture
 * Service-Oriented Architecture @ xml.com
 * SOA For Dummies
 * EMBL in XML

SOAP

 * SOAP tutorial @ W3Schools
 * SOAPClient.com resources and services for SOAP (client, UDDI browser, etc)

RDDL

 * XML Resource Directory Description Language (RDDL)
 * URIs For Commonly Defined Link Purposes
 * Cover Pages
 * RDDL Me This: What Does a Namespace URL Locate?

Examples

 * Amazon Web Services
 * Google API

Life sciences

 * Taverna project - biological workflows using web services
 * BioMOBY - ontology-based messaging and data integration standard
 * BioHackathon 2008
 * InParanoid - Eukaryotic Ortholog Groups
 * Intelligent client for integrating bioinformatics services
 * BIND SOAP - Biomolecular interaction network SOAP API
 * Entrez Utilities Web Service from NCBI
 * Web Services in Bioinformatics - introductory course