Harvard:Biophysics 101/2007/Project/Inputs/Outputs

Xiaodi 1st code


 * input: fasfa file
 * output: outputs a class of allelic variants

Chris


 * input: dict class (some criteria should go into the class)
 * output: dict class

Xiaodi 2nd code: local searches


 * input: fasfa file
 * output: mutations (format undetermined), position, and nature in the mutation, and protein sequence

Mike


 * input: protein sequence, and snp location (position is important)
 * output: (I wasn't able to record this)

Kay


 * input: Xiaodi's output
 * output: rs#

Resmi and Cynthia


 * input: list of rs#
 * output: raw list of mesh terms, parsed list of mesh terms (slash?) list of strings
 * other outputs: print article titles, string is "mesh_?"

Zach


 * input: list of strings that are mesh terms, specifically major mesh terms, the most relevant terms, an object that encapulates multiple strings
 * output: CDC ID, of the most prevalent hit

Tiffany's code


 * input: string disease name
 * output: list of URLs, list of clinical trials

Deniz


 * input: Zach's input, Tiff's input
 * output: output any feed that the class wants (clinical trials, news, resources)