Mesoplasma florum:Tetracycline resistance

Mutations of 16S region conveying Tetracycline resistance
 * G1058C PMID 9661007 (P. acne)
 * G92T
 * T93-
 * C95G
 * T96G
 * G360A
 * G741A
 * A782C
 * C883G
 * A965G PMID 12435699, PMID 15901694 (H. pylori)
 * G966T
 * A967C
 * G1026A
 * C1033T
 * T1136C
 * C1167T
 * A1299G
 * C1293T

Alignment of E. coli 16S with M. florum 16S sequences MF GENBANK AF300327
1 EC        AAATTGAAGA GTTTGATCAT GGCTCAGATT GAACGCTGGC GGCAGGCCTA MF        -- CT GGCTCAGGAY GAACGCTGGC GGCATGCCTA 51 ACACATGCAA GTCGAACGGT AACAGGAAGA AGCTTGCTTC TTTGCTGACG AGTGGCGGAC ATACATGCAA GTCGAACGG- ---AGG TGCTTGCACC TC AGTGGCGAAC 111 GGGTGAGTAA TGTCTG GGAAACTGCC TGATGGAGGG GGATAACTAC TGGAAACGGT GGGTGAGTAA CACGTATCT- --AATCTACC TTCTAGCGGG GGATAACTTT TGGAAACGAA 167 AGCTAATACC GCA--- --TAACGTCG CAAGACCAAA GAGGGG GACCTTCGGG AGGTAATACC GCATGTGGAT GTTATTATCG CATGAGAAAA CATTCAAAGA TCCGTTTGGA 214 CCTCTTGCCA TC--GGATGT GCCCAGATGG GATTAGCTAG TAGGTGGGGT AACGGCTCAC TCACTAGAAG ATGAGGATGC GGC--G TATTAGCTAG TAGGCGGGGT AAAGGCCCAC 272 CTAGGCGACG ATCCCTAGCT GGTCTGAGAG GATGACCAGC CACACTGGAA CTGAGACACG CTAGGCGATG ATACGTAGCC GAACTGAGAG GTTGATCGGC CACATTGGGA CTGAGATACG 332 GTCCAGACTC CTACGGGAGG CAGCAGTGGG GAATATTGCA CAATGGGCGC AAGCCTGATG GCCCAGACTC CTACGGGAGG CAGCAGTAGG GAATTTTTCA CAATGGACGA AAGTCTGATG 392 CAGCCATGCC GCGTGTATGA AGAAGGCCTT CGGGTTGTAA AGTACTTTCA GCGGGGAGGA AAGCAATGCC GCGTGAGTGA TGACGGCCTT CGGGTTGTAA AGCTCTGTTG TAAGGGAAGA 452 AG--GGAGTA AAGTTAATAC CTTTGCTCAT TGACGTTACC CGCAGAAGAA GCACCGGCTA AAACATAGGA GAGGAAATGC TCTTATC--T TGACGGTACC TTACCAGAAA GCCACGGCTA 510 ACTCCGTGCC AGCAGCCGCG GTAATACGGA GGGTGCAAGC GTTAATCGGA ATTACTGGGC ACTATGTGCC AGCAGCCGCG GTAATACATA GGTGGCAAGC GTTATCCGGA TTTATTGGGC 570 GTAAAGCGCA CGCAGGCGGT TTGTTAAGTC AGATGTGAAA TCCCCGGGCT CAACCTGGGA GTATAGGGTG CGTAGGCGGT TTCGCAAGTT TGAGGTTAAA GCCCGGAGCT CAACTCCGGT 630 ACTGCATCTG ATACTGGCAA GCTTGAGTCT CGTAGAGGGG GGTAGAATTC CAGGTGTAGC TC-GCCTTGA AAACTGCGGG ACTAGAATAT CAGAGAGGTA AGCGGAATTC CATGTGTAGC 690 GGTGAAATGC GTAGAGATCT GGAGGAATAC CGGTGGCGAA GGCGGCCCCC TGGACGAAGA GGTAAAATGC GTAGATATAT GGAAGAACAC CAGTGGCGAA AGCGGCTTAC TGGCTGATTA 750 CTGACGCTCA GGTGCGAAAG CGTGGGGAGC AAACAGGATT AGATACCCTG GTAGTCCACG TTGACGCTGA GGCACGAAAG CGTGGGGAGC AAATAGGATT AGATACCCTA GTAGTCCACG 810 CCGTAAACGA TGTCGAC--- ---TTGGAGG TTGTGCCCTT GAGGCGTGGC TTCCGGAGCT CCGTAAACGT TGAGTACTAA GTATTGGGGA TTACCTCAGT G- --CTGCAGCT 864 AACGCGTTAA GTCGACCGCC TGGGGAGTAC GGCCGCAAGG TTAAAACTCA AATGAATTGA AACGCATTAA GTACTCCGCC TGAGTAGTAT GCTCGCAAGA GTGAAACTCA AAGGAATTGA 924 CGGGGGCCCG CACAAGCGGT GGAGCATGTG GTTTAATTCG ATGCAACGCG AAGAACCTTA CGGGGACCCG CACAAGTGGT GGAGCATGTG GTTTAATTCG AAGCAACACG AAGAACCTTA 984 CCTGGTCTTG ACATCCA--- CAGAACTTTC CAGAGATGGA TTGGTGCCTT CGGGAACTGT CCAGGGCTTG ACATACAGTG CAAAGC--TA CAGAGATGTA GTGGAGGTT- AACATT 1041 GAGACAGGTG CTGCATGGCT GTCGTCAGCT CGTGTTGTGA AATGTTGGGT TAAGTCCCGC GATACAGGTG GTGCATGGTT GTCGTCAGTT CGTGCCGTGA GGTGTTGGGT TAAGTCCCGC 1101 AACGAGCGCA ACCCTTATCT TTTGTTGCCA GCGGTCCGGC CGGGAACTCA AAGGAGACTG AACGAACGCA ACCCTTGTCG TTAGTTACTA AC-ATTAAGT TGAGGACTCT AACGAGACTG 1161 CCAGTGATAA ACTGGAGGAA GGTGGGGATG ACGTCAAGTC ATCATGGCCC TTACGACCAG CTAGTG-TAA GCTAGAGGAA GGTGGGGATG ACGTCAAATC ATCATGCCCC TTATGTCCTG 1221 GGCTACACAC GTGCTACAAT GGCGCATACA AAGAGAAGCG ACCTCGCGAG AGCAAGCGGA GGCTACACAC GTGCTACAAT GGCCGATACA AAGAGTCGCA ATCTCGCGAG GGGGAGCTAA 1281 CCTCATAAAG TGCGTCGTAG TCCGGATTGG AGTCTGCAAC TCGACTCCAT GAAGTCGGAA TCTCAAAAAG TCGGTCTCAG TTCGGATTGA AGTCTGCAAC TCGACTTCAT GAAGCCGGAA 1341 TCGCTAGTAA TCGTGGATCA GA-ATGCCAC GGTGAATACG TTCCCGGGCC TTGTACACAC TCACTAGTAA TCGCGAATCA GCTATGTCGC GGTGAATACG TTCTCGGGTC TTGTACACAC 1400 CGCCCGTCAC ACCATGGGAG TGGGTTGCAA AAGAAGTAGG TAGCTTAACC TTCGGGAGGG CGCCCGTCAA ACCACGAGAG TTGGTAATAC CAGAAGTACG TTTCCTAACC GTAAGGAAGG 1460 CGCTTACCAC TTTGTGATTC ATGACTGGGG TGAAGTCGTA ACAAGGTAAC CGTAGGGGAA CGCGTCCCAA GGTAGGACTA GCGATTGGGG TTAAGTCGTA ACAAGGTATC CGTACGGGAA 1520 CCTGCGGTTG GATCACCTCC TTA       1542 CGTGCGGATG GATCAC ---

Canonical numbering of 16S ribosomal RNA sequence is keyed off of the E. coli sequence, given here in FASTA format and in Genbank format. This sequence is from GENBANK U00096, bases 223771-225312.

>gi|48994873:223771-225312 Escherichia coli K12 MG1655, complete genome AAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGT AACAGGAAGAAGCTTGCTTCTTTGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGAT GGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTC GGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGAC GATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAG GCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTATGAAGAAGGCCT TCGGGTTGTAAAGTACTTTCAGCGGGGAGGAAGGGAGTAAAGTTAATACCTTTGCTCATTGACGTTACCC GCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAA TTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAA CTGCATCTGATACTGGCAAGCTTGAGTCTCGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCG TAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACGAAGACTGACGCTCAGGTGCGAAAGC GTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTTGGAGGTTGTGCC CTTGAGGCGTGGCTTCCGGAGCTAACGCGTTAAGTCGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAAC TCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACC TTACCTGGTCTTGACATCCACAGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTG CTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCT TTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATG ACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACAAAGAGAAGCG ACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCAT GAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACC GCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACT TTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCT TA

1 aaattgaaga gtttgatcat ggctcagatt gaacgctggc ggcaggccta acacatgcaa 61 gtcgaacggt aacaggaaga agcttgcttc tttgctgacg agtggcggac gggtgagtaa 121 tgtctgggaa actgcctgat ggagggggat aactactgga aacggtagct aataccgcat 181 aacgtcgcaa gaccaaagag ggggaccttc gggcctcttg ccatcggatg tgcccagatg 241 ggattagcta gtaggtgggg taacggctca cctaggcgac gatccctagc tggtctgaga 301 ggatgaccag ccacactgga actgagacac ggtccagact cctacgggag gcagcagtgg 361 ggaatattgc acaatgggcg caagcctgat gcagccatgc cgcgtgtatg aagaaggcct 421 tcgggttgta aagtactttc agcggggagg aagggagtaa agttaatacc tttgctcatt 481 gacgttaccc gcagaagaag caccggctaa ctccgtgcca gcagccgcgg taatacggag 541 ggtgcaagcg ttaatcggaa ttactgggcg taaagcgcac gcaggcggtt tgttaagtca 601 gatgtgaaat ccccgggctc aacctgggaa ctgcatctga tactggcaag cttgagtctc 661 gtagaggggg gtagaattcc aggtgtagcg gtgaaatgcg tagagatctg gaggaatacc 721 ggtggcgaag gcggccccct ggacgaagac tgacgctcag gtgcgaaagc gtggggagca 781 aacaggatta gataccctgg tagtccacgc cgtaaacgat gtcgacttgg aggttgtgcc 841 cttgaggcgt ggcttccgga gctaacgcgt taagtcgacc gcctggggag tacggccgca 901 aggttaaaac tcaaatgaat tgacgggggc ccgcacaagc ggtggagcat gtggtttaat 961 tcgatgcaac gcgaagaacc ttacctggtc ttgacatcca cagaactttc cagagatgga 1021 ttggtgcctt cgggaactgt gagacaggtg ctgcatggct gtcgtcagct cgtgttgtga 1081 aatgttgggt taagtcccgc aacgagcgca acccttatct tttgttgcca gcggtccggc 1141 cgggaactca aaggagactg ccagtgataa actggaggaa ggtggggatg acgtcaagtc 1201 atcatggccc ttacgaccag ggctacacac gtgctacaat ggcgcataca aagagaagcg 1261 acctcgcgag agcaagcgga cctcataaag tgcgtcgtag tccggattgg agtctgcaac 1321 tcgactccat gaagtcggaa tcgctagtaa tcgtggatca gaatgccacg gtgaatacgt 1381 tcccgggcct tgtacacacc gcccgtcaca ccatgggagt gggttgcaaa agaagtaggt 1441 agcttaacct tcgggagggc gcttaccact ttgtgattca tgactggggt gaagtcgtaa 1501 caaggtaacc gtaggggaac ctgcggttgg atcacctcct ta