User:J. C. Martinez-Garcia/Notebook/HMS Activities/2008/12/29

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 * style="background-color: #F2F2F2" align="center"|  |Main project page


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Concrete goals for each project

 * Biological Modeling:
 * To be accepted as a modeler of biological systems (Harvard and MIT people).
 * To be included in modeling task in biology (Harvard and MIT projects).
 * To create models for epigenetic based properties of biological systems (Jablonka).
 * To conceive a platform for experimental; validation for dynamical responses of bacteria and mammalian cells (including microfluidic technology as well as computer based modeling -Kappa, little-b, Modelica- and bioinformatics), centered around cancer molecular medicine and research on evolution.
 * Economical resources:
 * Cinvestav-Resources (local project on systems biology, requested to René Asomoza); private resources (CARSO, international awards; Mexico City government -synthetic biology, maybe consider a project around yogurt and medical applications, so it would be convenient to contact MIT guys-).
 * Protein Stuff and Experimental Training:
 * Increase my level of training on tissu culture and thi kind of things (constructions of the vector is an important preliminary thing)
 * Robustness:
 * Develop an experimental project around robustness as a conserved quantity (it seems that at this level the best thing to do is to follow a philogenetic approach using existing bioinformatics approaches).
 * To have a deepest insight in robustness measurements (why not to tackle robustness in social systems, in this case the paper by Jessica Flack and Krakauer on power and networks could be useful).
 * Network Theory:
 * Connected with the previous point, it would be important to seee at what level the robustness of a power networks can be guaranteed and how to measure it.
 * Evolution and Learning:
 * Build the Burtzev algorithm in NetLogo.
 * Define the charcateristics of a possible experiment using the Jablonka Model.
 * Simulate the Jablonka cellular memory system.
 * Contact Drew Endy from Stanford to have his opinion about this question.


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