Registry of Standard Biological Models/Basic Component Models/Protein

CellML structure (CellML 1.1 spec)

 * Component: protein-molecule
 * Units:
 * Imported from Environment component
 * Variables:
 * time (public interface = in)
 * RiPS_IN (public interface = in )
 * proteinDegradationRate (public interface = none / init value = (depends on the protein))
 * protein (public interface = out / init value = 0.0 - maybe init value should also be an input parameter-)
 * MathML
 * $$\frac{d[protein]}{dtime} = RiPS_{IN} - proteinDegradationRate*[protein] $$

CellML File
CellMl Code







    



 

Comments

 * This component represents a Protein. It is characterized by the degradation rate of the protein.
 * It requires a 'RiPS-IN' input signal, it is provided by a RBS component, or a Promoter+RBS component