IGEM:UNAM Genomics Mexico/2009/Notebook/Wifi coli/2010/09/28

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 * style="background-color: #EEE"|[[Image:igem-logo-150px.png|150px]] WiFi coli: A communiColight system
 * style="background-color: #F2F2F2" align="center"|  |Main project page
 * style="background-color: #F2F2F2" align="center"|  |Main project page


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Modeling

 * Currrently modeling is working on Simbiology modeling and Kappa modeling.

At this meeting we re-propose the rules in our systems, because experimental results are not finished.

Rules
 * Red receptor
 * Cph8* + Phot → Cph8
 * Cph8 → Cph8*
 * OmpR + Cph8* → OmpRP + Cph8*
 * OmpRP → OmpR
 * 3OmpRP + OmpCO ↔ OmpCOc.Act
 * OmpCOc.Act → pCI + OmpCO + 3OmpRP
 * pCI + sCI0 → sCIOc.Act
 * pCI → DEG
 * sCIOc.Act → sCI0 + pCI
 * sCI0 → mRNA + sCI0


 * Green Emission
 * mRNA → DEG
 * mRNA → LuxA + LuxB
 * LuxA → DEG
 * LuxB → DEG
 * LuxA + LuxB ↔ LuxAB
 * LuxAB + LuxY ↔ LuxABY
 * LuxAB + R14CHO → LuxAB + Photons475 + R+COOH
 * LuxABY + R14CHO → LuxABY + Photons540 + R+COOH
 * Myr. Ac. + LuxD → R-CO + LuxD
 * R-CO + LuxC → R-COOH + LuxC
 * R COOH + LuxE → R14CHO + LuxE

These rules can be changed by other rules if they are wrong.