Bioinformatics of S-layer Proteins

Sections preceded with an R, are currently in progress and not yet complete

SbpA
SbpA Protein Sequence - AAF22978

FASTA protein

SbpA DNA Sequence

FASTA DNA

Compute pI/MW tool Theoretical pI/Mw: 4.80 / 132046.80

ProtParam tool Physico-chemical parameters:
 * 1) Number of amino acids: 1268
 * 2) SbpA Amino Acid Composition
 * 3) Total number of negatively charged residues (Asp + Glu): 122
 * 4) Total number of positively charged residues (Arg + Lys): 91
 * 5) SbpA Atomic composition:
 * 6) SbpA Extinction coefficients
 * 7) SbpA Other Parameters

REP No repeat detected

SAPS Statistical Analysis of Protein Sequence

R(add raw data) COILS  Coiled Coils

R(add raw data) Paircoil Scoring Form  Coiled Coils from Paircoils

R(add raw data) MultiCoil Scoring Form Coiled Coils that may dimeric or trimeric

SbsB
SbsB Protein Sequence - CAA66724.1

FASTA SbsB protein

SbsB DNA Sequence

FASTA sbsB DNA

Compute pI/MW tool Theoretical pI/Mw: 5.21 / 97916.32

RProtParam tool Physico-chemical parameters:
 * 1) Number of amino acids: 920
 * 2) SbsB Amino Acid Composition
 * 3) Total number of negatively charged residues (Asp + Glu): 109
 * 4) Total number of positively charged residues (Arg + Lys): 97
 * 5) SbsB Atomic composition:
 * 6) SbsB Extinction coefficients
 * 7) SbsB Other Parameters

RREP No repeat detected

RSAPS SbsB Statistical Analysis of Protein Sequence

COILS  SbsB Coiled Coils

Paircoil Scoring Form  SbsB Coiled Coils from Paircoils

MultiCoil Scoring Form SbsB Coiled Coils that may be dimeric or trimeric

Sap
Sap Protein Sequence - P49051

RFASTA protein

RSap DNA Sequence

RFASTA DNA

RCompute pI/MW tool Theoretical pI/Mw: 5.21 / 97916.32

RProtParam tool Physico-chemical parameters:
 * 1) Number of amino acids: 920
 * 2) Sap Amino Acid Composition
 * 3) Total number of negatively charged residues (Asp + Glu): 109
 * 4) Total number of positively charged residues (Arg + Lys): 97
 * 5) Sap Atomic composition:
 * 6) Sap Extinction coefficients
 * 7) Sap Other Parameters

RREP No repeat detected

RSAPS Sap Statistical Analysis of Protein Sequence

RCOILS  Sap Coiled Coils

RPaircoil Scoring Form  Sap Coiled Coils from Paircoils

RMultiCoil Scoring Form Sap Coiled Coils that may be dimeric or trimeric