Van Oudenaarden Lab:F58A4.7

Progress:

Probes designed: (03-01-2010 - Alexander van Oudenaarden)

Probes coupled:

Probes purified:

Probes tested:

Dyes available:

>F58A4.7a.1 (hlh-11 spliced coding region)

atggttcgttcggatagcgcagaagaagatcaaatcatcattgatgatggatttgatctaactgaagaggacgaggagat gatgagttcgggtacaggtgcattgcccgtgactatcgccgactggaattccgtgacaaatgcacgaatggcaccaccat ccatcatgtcagctgcttcggcatttgatttgacggcttctggaatgcagaattcgttgcgttctgtcttgcctacctcg acgattgggcatgcaccaatgctcgccaaccggtcactatcccaaccggcgccactttcaccaacgtcgctcgaccccga cagaagaatgcgtcggcaaattgccaattgcaacgagcggcggcggatgcagagcatcaatgcgggattcttggctctaa gagccttacttcccagaaaagagggagaaaagctgtcgaaggcggctattctgcagcaaactgcggatatggttcatcaa cttttgggacacaaaggagaagatatacctgacggtggagaacccaaaaaactcaaacttgaagaagatcaccacgacgc tgaccatcaagcgcaaatagcacatctccaaacaatattagaaactgaacgagccgcccgtaaggctttggagagtcaag taattcagctccgtgagctgctccaaatgacgacaacatcatcgcaagcatcgtcaccagtgacaccaagatctaatggt tctggtggtttcacattgccatcttcatatgcttcatcggctcttcctactccgttacgagaatcaccggaaaggaaacc atcatttcaagatacaacaagtactccgttgtctcttttgacactgaacggtagtccaacttcttctgaatcattggcgt ctcaacgtatattccatccgcctccaacattgccaagtttagagacaactgttatccgtcctacaccactaccaccaata tcagttgaaatatcatcaccatctctgtcaactccatcacctttgactgccgctccaataatcttctcaacagcagttcc aactcaatcgagtattttgttccaaacagcggcggcagcggtcacctcggccatgtctaccggtaactcgacacccgtcg cattgccacatcatctgcagggacataattctgcgtttgtaagcacacaaccgagcctgaccctgtctcaatcaatgcaa acaattgttgaagctattcgtcatttggagggaagtcatttcattccaacatctcctccaccaacctcacagacatcgct cgtccgttga

Name of probe set: hlh-11

Probes designed on Mon, 01 Mar 10 14:29:46 -0700

48 probes designed for target of length 1290

Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC

tgatcttcttctgcgctatc, hlh-11_1, 1, 13, 45

cgtcctcttcagttagatca, hlh-11_2, 2, 54, 45

tgtacccgaactcatcatct, hlh-11_3, 3, 77, 45

attccagtcggcgatagtca, hlh-11_4, 4, 110, 50

ccattcgtgcatttgtcacg, hlh-11_5, 5, 132, 50

agctgacatgatggatggtg, hlh-11_6, 6, 155, 50

ccgtcaaatcaaatgccgaa, hlh-11_7, 7, 177, 45

caacgaattctgcattccag, hlh-11_8, 8, 200, 45

tcgaggtaggcaagacagaa, hlh-11_9, 9, 222, 50

agcattggtgcatgcccaat, hlh-11_10, 10, 244, 50

ttgggatagtgaccggttgg, hlh-11_11, 11, 266, 55

atttgccgacgcattcttct, hlh-11_12, 12, 322, 45

aagaatcccgcattgatgct, hlh-11_13, 13, 373, 45

tgggaagtaaggctcttaga, hlh-11_14, 14, 396, 45

gacagcttttctccctcttt, hlh-11_15, 15, 418, 45

agtttgctgcagaatagccg, hlh-11_16, 16, 443, 50

gtcccaaaagttgatgaacc, hlh-11_17, 17, 471, 45

cgtcaggtatatcttctcct, hlh-11_18, 18, 495, 45

ttgagttttttgggttctcc, hlh-11_19, 19, 517, 40

gtcgtggtgatcttcttcaa, hlh-11_20, 20, 539, 45

ctatttgcgcttgatggtca, hlh-11_21, 21, 561, 45

cggctcgttcagtttctaat, hlh-11_22, 22, 597, 45

tgactctccaaagccttacg, hlh-11_23, 23, 619, 50

cagctcacggagctgaatta, hlh-11_24, 24, 641, 50

gcgatgatgttgtcgtcatt, hlh-11_25, 25, 666, 45

tagatcttggtgtcactggt, hlh-11_26, 26, 696, 45

aatgtgaaaccaccagaacc, hlh-11_27, 27, 718, 45

gccgatgaagcatatgaaga, hlh-11_28, 28, 742, 45

ttctcgtaacggagtaggaa, hlh-11_29, 29, 764, 45

atgatggtttcctttccggt, hlh-11_30, 30, 786, 45

ggagtacttgttgtatcttg, hlh-11_31, 31, 808, 40

cgttcagtgtcaaaagagac, hlh-11_32, 32, 831, 45

gattcagaagaagttggact, hlh-11_33, 33, 853, 40

gaatatacgttgagacgcca, hlh-11_34, 34, 875, 45

aaacttggcaatgttggagg, hlh-11_35, 35, 901, 45

aggacggataacagttgtct, hlh-11_36, 36, 923, 45

ctgatattggtggtagtggt, hlh-11_37, 37, 945, 45

gttgacagagatggtgatga, hlh-11_38, 38, 973, 45

ttattggagcggcagtcaaa, hlh-11_39, 39, 1002, 45

gttggaactgctgttgagaa, hlh-11_40, 40, 1024, 45

gccgctgtttggaacaaaat, hlh-11_41, 41, 1054, 45

tcgagttaccggtagacatg, hlh-11_42, 42, 1092, 50

tatgtccctgcagatgatgt, hlh-11_43, 43, 1128, 45

tgtgtgcttacaaacgcaga, hlh-11_44, 44, 1150, 45

attgattgagacagggtcag, hlh-11_45, 45, 1177, 45

ccaaatgacgaatagcttca, hlh-11_46, 46, 1209, 40

gttggaatgaaatgacttcc, hlh-11_47, 47, 1231, 40

atgtctgtgaggttggtgga, hlh-11_48, 48, 1257, 50