Van Oudenaarden Lab:F33D11.4

Progress:

Probes designed: (02-28-2010 - Alexander van Oudenaarden)

Probes coupled:

Probes purified:

Probes tested:

Dyes available:

>F33D11.4 (ceh-12 spliced coding region)

atgatgttttcctcaatagattctcttcttaaaatctcaacttcttctcaaaatgaagatcaaaaattagagagtcaccc ctcccctccatcacaaattccaaattattcaaccagctgctctgaggaattaatgaaaatggcggcaaaagcagcccaat ttgctgctcaagcctcgctggagaactcattttccagttctacttctcccacatcaactgttactccactttctgcatac acgtcactggttcagccggtccttcctttgatctacgatcatttagcattaacatattcagtaaatgcatggcaagcatg gggaaagatgagaagaccacgaaccgcattcagcagtgaacaattagttcaattagagaaacaattctcagataatcgat atttgagtagaccaagaagatatcaattggcacaacaattatctctttcagagactcagatcaaaatctggttccaaaat cgtcgaatgaaaaacaaacgttgcccatcttcaactccaattcaatcaacttcctcttcttga

Name of probe set: ceh-12

Probes designed on Sun, 28 Feb 10 18:52:14 -0700

24 probes designed for target of length 543 (target too short for 48 probes)

Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC

tctattgaggaaaacatcat, ceh-12_1, 1, 1, 30

agttgagattttaagaagag, ceh-12_2, 2, 23, 30

tttgatcttcattttgagaa, ceh-12_3, 3, 45, 25

ggggaggggtgactctctaa, ceh-12_4, 4, 67, 60

ataatttggaatttgtgatg, ceh-12_5, 5, 89, 25

attcctcagagcagctggtt, ceh-12_6, 6, 111, 50

gcttttgccgccattttcat, ceh-12_7, 7, 133, 45

aggcttgagcagcaaattgg, ceh-12_8, 8, 156, 50

ctggaaaatgagttctccag, ceh-12_9, 9, 178, 45

agttgatgtgggagaagtag, ceh-12_10, 10, 200, 45

gtgtatgcagaaagtggagt, ceh-12_11, 11, 223, 45

aaggaccggctgaaccagtg, ceh-12_12, 12, 245, 60

gctaaatgatcgtagatcaa, ceh-12_13, 13, 268, 35

ccatgcatttactgaatatg, ceh-12_14, 14, 293, 35

ttctcatctttccccatgct, ceh-12_15, 15, 315, 45

actgctgaatgcggttcgtg, ceh-12_16, 16, 338, 55

tctctaattgaactaattgt, ceh-12_17, 17, 360, 25

tatcgattatctgagaattg, ceh-12_18, 18, 382, 30

gatatcttcttggtctactc, ceh-12_19, 19, 405, 40

agagataattgttgtgccaa, ceh-12_20, 20, 427, 35

gattttgatctgagtctctg, ceh-12_21, 21, 449, 40

tcattcgacgattttggaac, ceh-12_22, 22, 471, 40

gaagatgggcaacgtttgtt, ceh-12_23, 23, 493, 45

ggaagttgattgaattggag, ceh-12_24, 24, 515, 40