Van Oudenaarden Lab:C41G7.5

Progress:

Probes designed: (02-28-2010 - Alexander van Oudenaarden)

Probes coupled:

Probes purified:

Probes tested:

Dyes available:

>C41G7.5b.2 (ahr-1 spliced coding region)

atgcttcttccttacgacagctctaccatcagccgtctggataaactctccgtgctccgacttgcagtcagctttcttca atgcaaagctcactttcaagcatgtctacacaactctcagttcctgtcagctggctttccaatgtcaactcattcgtatt cttatcaaccacaccctcctataccattttcaaacaaagttccaacaatctttgatctacgaattggaacaccaatgttg gacccagaagaatccaattttgaagaaattagtctgaaatcacttggtggatttattcttgttctcaatgacaatggaga aatctattatgcatctgaaaacgtagaaaattatttgggatttcatcaatctgatgttctacatcaaccagtttatgatc ttatacattcggaagatcgtgatgatattcgtcaacaacttgattcgaactttcatattccaacgtcatctgcctcaaat caatttgatgtttttgcaccacaaaactcaaaatatctggaacgtaatgtgaacgcaagatttcggtgcttattggataa cacatgtggatttttgagaattgacatgcgcggaaagttgatgtctctacatggattaccatcatcgtatgtaatgggaa gaactgcctcgggtccagtgctcggaatgatttgcgtttgcacaccttttgtgccgccttcaacatccgatttagcatcc gaagacatgattttgaaaacaaaacatcagttggatggagctttagtatctatggatcaaaaggtttatgaaatgttaga aattgatgaaactgatctaccaatgccactctataatctagtccacgtggaagatgcagtctgcatggctgaagctcata aagaagctatcaaaaacgggtcatctggtcttctggtatatcgtctagtcagcacaaaaactcgtcgtacgtattttgtt caaagctcctgtaggatgttttacaagaatagcaaaccggaatcaattggcttaactcacagattactcaacgaagtgga aggtacaatgcttttagaaaaaagaagcacattgaaagctaaactattatcatttgacgattcatttcttcaatctccac gaaatctccaatcaacagctgcacttccattaccatctgtattgaaagatgatcaagattgtttggaaccatcaacatcc aattccctattcccatccgttcctgttccaactcctacaacaaccaaagcaaatcgccgacgaaaagaaaacagtcatga aattgttccaacaatcccatcaattccaattccaactcattttgatatgcaaatgtttgatccatcatggaatcatggag ttcatccaccagcatggcctcatgatgtatatcatttgacacaatatcctccaacatatccacatccaccaggaactgtt ggataccctgatgttcaaattgcacctgtggattaccctggatggcatccaaatgatatacatatgacacagctgccaca cggtttcacaccagatgctcaaaagctcgtcccaccacatccacaaatgagccatttcaccgaatatccgaccccttcaa cacaccacgatcttcatcatcacccattaaaacaagacaattttcatttaatctctgaagtaaccaatcttctaggcacg tga

Name of probe set: ahr-1

Probes designed on Sun, 28 Feb 10 17:56:16 -0700

48 probes designed for target of length 1683

Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC

ctgtcgtaaggaagaagcat, ahr-1_1, 1, 1, 45

agtttatccagacggctgat, ahr-1_2, 2, 28, 45

aagaaagctgactgcaagtc, ahr-1_3, 3, 59, 45

gcttgaaagtgagctttgca, ahr-1_4, 4, 82, 45

gaactgagagttgtgtagac, ahr-1_5, 5, 104, 45

ttgacattggaaagccagct, ahr-1_6, 6, 129, 45

gagggtgtggttgataagaa, ahr-1_7, 7, 159, 45

ggtgttccaattcgtagatc, ahr-1_8, 8, 214, 45

ttggattcttctgggtccaa, ahr-1_9, 9, 238, 45

ccaccaagtgatttcagact, ahr-1_10, 10, 271, 45

ccattgtcattgagaacaag, ahr-1_11, 11, 298, 40

catcagattgatgaaatccc, ahr-1_12, 12, 357, 40

catcacgatcttccgaatgt, ahr-1_13, 13, 405, 45

gcagatgacgttggaatatg, ahr-1_14, 14, 454, 45

cgttcacattacgttccaga, ahr-1_15, 15, 516, 45

gtgttatccaataagcaccg, ahr-1_16, 16, 544, 45

cgcgcatgtcaattctcaaa, ahr-1_17, 17, 573, 45

cccattacatacgatgatgg, ahr-1_18, 18, 619, 45

aaatcattccgagcactgga, ahr-1_19, 19, 654, 45

atgttgaaggcggcacaaaa, ahr-1_20, 20, 687, 45

gctccatccaactgatgttt, ahr-1_21, 21, 742, 45

ggcattggtagatcagtttc, ahr-1_22, 22, 808, 45

ccacgtggactagattatag, ahr-1_23, 23, 831, 45

ttcagccatgcagactgcat, ahr-1_24, 24, 854, 50

gacccgtttttgatagcttc, ahr-1_25, 25, 883, 45

acgatataccagaagaccag, ahr-1_26, 26, 905, 45

gacgagtttttgtgctgact, ahr-1_27, 27, 927, 45

cctacaggagctttgaacaa, ahr-1_28, 28, 956, 45

ccaattgattccggtttgct, ahr-1_29, 29, 991, 45

ccacttcgttgagtaatctg, ahr-1_30, 30, 1020, 45

ggagatttcgtggagattga, ahr-1_31, 31, 1110, 45

aatggaagtgcagctgttga, ahr-1_32, 32, 1132, 45

ggatgttgatggttccaaac, ahr-1_33, 33, 1181, 45

aacaggaacggatgggaata, ahr-1_34, 34, 1208, 45

gctttggttgttgtaggagt, ahr-1_35, 35, 1231, 45

gttttcttttcgtcggcgat, ahr-1_36, 36, 1253, 45

ggaattgatgggattgttgg, ahr-1_37, 37, 1288, 45

ccatgattccatgatggatc, ahr-1_38, 38, 1339, 45

atacatcatgaggccatgct, ahr-1_39, 39, 1371, 45

gatgtggatatgttggagga, ahr-1_40, 40, 1407, 45

atcagggtatccaacagttc, ahr-1_41, 41, 1433, 45

ggtaatccacaggtgcaatt, ahr-1_42, 42, 1458, 45

ggcagctgtgtcatatgtat, ahr-1_43, 43, 1498, 45

ttgagcatctggtgtgaaac, ahr-1_44, 44, 1523, 45

atggctcatttgtggatgtg, ahr-1_45, 45, 1556, 45

tgttgaaggggtcggatatt, ahr-1_46, 46, 1583, 45

tgggtgatgatgaagatcgt, ahr-1_47, 47, 1607, 45

gtgcctagaagattggttac, ahr-1_48, 48, 1660, 45