Wikiomics:Linux packages

Biopackages.net
http://biopackages.net - A comprehensive suite of RPM packages for genomic sequence, gene mapping, and microarray analysis. Core targeted platforms are Fedora Core Linux and Centos Linux. Some packages are also available for Darwin (Apple MacOS) and Cygwin (Windows Unix emulation environment)

BIOrpms
http://apt.bea.ki.se/

BioLinux
http://www.biolinux.org/