Van Oudenaarden Lab:F57C12.3

Progress:

Probes designed: (03-01-2010 - Alexander van Oudenaarden)

Probes coupled:

Probes purified:

Probes tested:

Dyes available:

>F57C12.3 (hlh-19 spliced coding region)

tctgaacataagataacaaaatacttagctttcttcagtattacgtaattggtgatattttataaattcaaa

atgtcacgtgaacgtgctaacgctcgagaacgatgccggcaaaaatcaatcggcaacgcattcaacatgttgcgcaacca tcttccgaagcaattacgagatcgaaaaccgtcgaaagcggagaccttaaagtcagctgcgcaatatatatctcatctat tgaggattttggagaaagaaatagaaaactcttcgaataatttaaaagatgaacatcaaaaagaccctagtttgaccacg ccttcacatctgaattcgaaaattgaagtatgctatgcacaccaaaatggagaatgggtcccgccagaatgtcattttgt tgtgaactatgattga

atatttatttttattaattgtgtattgttttacccactcatttttatgcaatttttacactaatcaaactttatcaa aaaaaccaattttctattaataaatgtgaatgaataggtattgc

Name of probe set: hlh-19

Probes designed on Mon, 01 Mar 10 14:41:31 -0700

24 probes designed for target of length 529 (target too short for 48 probes)

Probe (5'->3'), Probe name, Probe number, Probe position, Percent GC

tttgttatcttatgttcaga, hlh-19_1, 1, 1, 25

aatactgaagaaagctaagt, hlh-19_2, 2, 23, 30

tataaaatatcaccaattac, hlh-19_3, 3, 45, 20

cgttcacgtgacattttgaa, hlh-19_4, 4, 67, 40

gcatcgttctcgagcgttag, hlh-19_5, 5, 89, 55

cgttgccgattgatttttgc, hlh-19_6, 6, 111, 45

tggttgcgcaacatgttgaa, hlh-19_7, 7, 133, 45

atctcgtaattgcttcggaa, hlh-19_8, 8, 155, 40

tctccgctttcgacggtttt, hlh-19_9, 9, 177, 50

tattgcgcagctgactttaa, hlh-19_10, 10, 199, 40

aatcctcaatagatgagata, hlh-19_11, 11, 221, 30

agttttctatttctttctcc, hlh-19_12, 12, 243, 30

tcatcttttaaattattcga, hlh-19_13, 13, 265, 20

caaactagggtctttttgat, hlh-19_14, 14, 287, 35

aattcagatgtgaaggcgtg, hlh-19_15, 15, 309, 45

gcatagcatacttcaatttt, hlh-19_16, 16, 331, 30

gacccattctccattttggt, hlh-19_17, 17, 353, 45

caacaaaatgacattctggc, hlh-19_18, 18, 375, 40

ataaatattcaatcatagtt, hlh-19_19, 19, 397, 15

aaacaatacacaattaataa, hlh-19_20, 20, 419, 15

attgcataaaaatgagtggg, hlh-19_21, 21, 441, 35

ataaagtttgattagtgtaa, hlh-19_22, 22, 463, 20

taatagaaaattggtttttt, hlh-19_23, 23, 485, 15

atacctattcattcacattt, hlh-19_24, 24, 507, 25