User:Lindenb/Notebook/UMR915/20110106

VCF Annotation with picard
wrote a tool annotating the VCFs with :
 * number of repeated bases under the mutation
 * base usage under the mutation

http://code.google.com/p/code915/source/browse/trunk/tools/src/java/fr/inserm/umr915/tools/VCFAnnotWithPicard.java